RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GBP2P32456 591 aaPredicted RBP13.59□□□□□ -0.23
TPM3-204ENST00000323144 NPTX2P47972 431 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
TPM3-204ENST00000323144 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 RABEP1Q15276 862 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 FAM171A1Q5VUB5 890 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 TMEM130Q8N3G9 435 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
TPM3-204ENST00000323144 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPM3-204ENST00000323144 FNIP2Q9P278 1114 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
TPM3-204ENST00000323144 MYO15AQ9UKN7 3530 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 CCDC169A6NNP5 214 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 ABLIM1O14639 778 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 PAPLNO95428 1278 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
TPM3-204ENST00000323144 PRPHP41219 470 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 CLCNKBP51801 687 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 OSTNP61366 133 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 NTHL1P78549 312 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 ATP2C1P98194 919 aaPredicted RBP13.58□□□□□ -0.24
TPM3-204ENST00000323144 CREMQ03060 361 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 ZRSR1Q15695 479 aaKnown RBP13.58□□□□□ -0.24
TPM3-204ENST00000323144 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 LILRA6Q6PI73 481 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 LRRC15Q8TF66 581 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
TPM3-204ENST00000323144 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 SNX27Q96L92 541 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 PLIN2Q99541 437 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 CLSTN3Q9BQT9 956 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 TTPALQ9BTX7 342 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
TPM3-204ENST00000323144 KCNK12Q9HB15 430 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 ZDHHC7Q9NXF8 308 aa13.58□□□□□ -0.24
TPM3-204ENST00000323144 H0Y858 1186 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 SLC16A4O15374 487 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 ZMYND10O75800 440 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 C8AP07357 584 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 GJB2P29033 226 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 GRM5P41594 1212 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 BRCC3P46736 316 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 EFNA5P52803 228 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 DMP1Q13316 513 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 TDGQ13569 410 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 KRT79Q5XKE5 535 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 RINT1Q6NUQ1 792 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 RSPO2Q6UXX9 243 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 SIX5Q8N196 739 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 LNX1Q8TBB1 728 aaPredicted RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 ACO2Q99798 780 aaKnown RBP13.57□□□□□ -0.24
TPM3-204ENST00000323144 RHOBTB2Q9BYZ6 727 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 MFSD1Q9H3U5 465 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 PIDD1Q9HB75 910 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
TPM3-204ENST00000323144 VPS13AQ96RL7 3174 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 TMEM189-UBE2V1I3L0A0 370 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 LAD1O00515 517 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 CCL16O15467 120 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
TPM3-204ENST00000323144 CFHP08603 1231 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 NPR3P17342 541 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 PROZP22891 400 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 HTR4Q13639 388 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 SEZ6Q53EL9 994 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
TPM3-204ENST00000323144 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
TPM3-204ENST00000323144 GPR65Q8IYL9 337 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 SLC7A14Q8TBB6 771 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 HDAC7Q8WUI4 952 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 DRC1Q96MC2 740 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
TPM3-204ENST00000323144 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
TPM3-204ENST00000323144 PRKD2Q9BZL6 878 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
TPM3-204ENST00000323144 EPS15L1Q9UBC2 864 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms