RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 OCM2P0CE71 109 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 OCMP0CE72 109 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 DPH5Q9H2P9 285 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GRSF1Q12849 480 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GRPEL2Q8TAA5 225 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 FAM45AQ8TCE6 357 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 OTUD7AQ8TE49 926 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 PITPNM3Q9BZ71 974 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SULT1B1O43704 296 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 TSC22D2O75157 780 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 RABL6Q3YEC7 729 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 MND1Q9BWT6 205 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 ZHX2Q9Y6X8 837 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 UNC45BQ8IWX7 931 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 JAG2Q9Y219 1238 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GFPT2O94808 682 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SFNP31947 248 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GTF2IP78347 998 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 OCLNQ16625 522 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 TMEM63BQ5T3F8 832 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SPICE1Q8N0Z3 855 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 MYL10Q9BUA6 226 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 HPCAL4Q9UM19 191 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 UNC13BO14795 1591 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SH3D21A4FU49 640 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GSPT1P15170 499 aaKnown RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 CHRNA3P32297 505 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 PSMA8Q8TAA3 256 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 CINPQ9BW66 212 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 NDST4Q9H3R1 872 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 BMP3P12645 472 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ADSLP30566 484 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 RSBN1Q5VWQ0 802 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SNX32Q86XE0 403 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 TADA1Q96BN2 335 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 CACNA2D2Q9NY47 1150 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 AKT3Q9Y243 479 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 PLTPP55058 493 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 TBC1D22BQ9NU19 505 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ADD2P35612 726 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 TMED2Q15363 201 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FAAH2Q6GMR7 532 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SPOPLQ6IQ16 392 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 UNC13DQ70J99 1090 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 EAF2Q96CJ1 260 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 PGBD1Q96JS3 809 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 KCND2Q9NZV8 630 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 NRBP1Q9UHY1 535 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ZC3H13Q5T200 1668 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 BAG6P46379 1132 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FAM129BQ96TA1 746 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FAM95CA0A1B0GW59 222 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 EXOSC10Q01780 885 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 POLA2Q14181 598 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 DDI2Q5TDH0 399 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 RESP18Q5W5W9 173 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 THEM5Q8N1Q8 247 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FSD1LQ9BXM9 530 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SH2B2O14492 632 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 PJA2O43164 708 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 COPS2P61201 443 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 DPP9Q86TI2 863 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FOXP4Q8IVH2 680 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FAM9CQ8IZT9 166 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ADAM21Q9UKJ8 722 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 TEX13BQ9BXU2 312 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 WNT8AQ9H1J5 351 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 EHD3Q9NZN3 535 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 IL6P05231 212 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 AARSP49588 968 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ALDH18A1P54886 795 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 CHRNDQ07001 517 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 FAM47AQ5JRC9 791 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 DDX50Q9BQ39 737 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 RSL24D1Q9UHA3 163 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ARHGEF33A8MVX0 844 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SYNCRIPO60506 623 aaKnown RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ASNSP08243 561 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ACTN3Q08043 901 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-201ENST00000322507 ACAP3Q96P50 834 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 KIFC1Q9BW19 673 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 UBN1Q9NPG3 1134 aa10.22□□□□□ -0.77
COL12A1-201ENST00000322507 INO80B-WBP1J3KQ70 363 aa10.21□□□□□ -0.77
COL12A1-201ENST00000322507 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 DHX34Q14147 1143 aaKnown RBP10.21□□□□□ -0.77
COL12A1-201ENST00000322507 ANGPTL8Q6UXH0 198 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms