RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 KIAA0825Q8IV33 1275 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 LMO3Q8TAP4 145 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 SPOCK2Q92563 424 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 ZNF653Q96CK0 615 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 C9orf72Q96LT7 481 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 TBC1D10AQ9BXI6 508 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 ACP6Q9NPH0 428 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 SERPINB13Q9UIV8 391 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 PHTF1Q9UMS5 762 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 EMSYQ7Z589 1322 aa19.08■□□□□ 0.65
PRKCB-202ENST00000321728 CHMP2AO43633 222 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 TOM1O60784 492 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 FESP07332 822 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 EPHB2P29323 1055 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 WDR4P57081 412 aaKnown RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 DLG4P78352 724 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 MRPS35P82673 323 aaKnown RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 CETN1Q12798 172 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 RBM26Q5T8P6 1007 aaKnown RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 ZNF720Q7Z2F6 126 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 RPGRQ92834 1020 aaKnown RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 PLVAPQ9BX97 442 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 VAV3Q9UKW4 847 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 AHCYL1O43865 530 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 SNUPNO95149 360 aaKnown RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 GAS8O95995 478 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 ALDH3A1P30838 453 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 CACNB3P54284 484 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 TSNAXIP1Q2TAA8 658 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 USH1GQ495M9 461 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 STXBP4Q6ZWJ1 553 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 PRUNE1Q86TP1 453 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 TTC8Q8TAM2 541 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 KAT5Q92993 513 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 POLR3CQ9BUI4 534 aaPredicted RBP19.08■□□□□ 0.64
PRKCB-202ENST00000321728 TRAIPQ9BWF2 469 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 SLCO1B3Q9NPD5 702 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 DMAC2Q9NW81 257 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 LGALS13Q9UHV8 139 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 STARD13Q9Y3M8 1113 aa19.08■□□□□ 0.64
PRKCB-202ENST00000321728 C10orf71Q711Q0 1435 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 SPDYE5A6NIY4 337 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 TCEA3O75764 348 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 PTDSS1P48651 473 aaKnown RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 TUBP50607 506 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 YARSP54577 528 aaKnown RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 GRIPAP1Q4V328 841 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 ODR4Q5SWX8 454 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 RNF217Q8TC41 542 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 CRYGNQ8WXF5 182 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 SLCO2A1Q92959 643 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 CPSF2Q9P2I0 782 aaKnown RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 DAGLAQ9Y4D2 1042 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 ENTPD5O75356 428 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 MTA2O94776 668 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 CBX6O95503 412 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 PECAM1P16284 738 aaPredicted RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 IVDP26440 423 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 GCLMP48507 274 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 C1orf186Q6ZWK4 172 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 NOP9Q86U38 636 aaKnown RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 INPP5DQ92835 1189 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 PCIF1Q9H4Z3 704 aa19.07■□□□□ 0.64
PRKCB-202ENST00000321728 PAPOLBQ9NRJ5 636 aaKnown RBP19.07■□□□□ 0.64
PRKCB-202ENST00000321728 FSCN2O14926 492 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 DCTN3O75935 186 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 GNAT1P11488 350 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 PAPOLAP51003 745 aaKnown RBP19.06■□□□□ 0.64
PRKCB-202ENST00000321728 SLC15A2Q16348 729 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 MUM1Q2TAK8 710 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 CYP4F22Q6NT55 531 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 SUPT20HQ8NEM7 779 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 ASAP3Q8TDY4 903 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 DNAJC9Q8WXX5 260 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 CNTNAP4Q9C0A0 1308 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 RASSF2P50749 326 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 KLC1Q07866 573 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 PTK6Q13882 451 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 TMEM154Q6P9G4 183 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 EPS8L1Q8TE68 723 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
PRKCB-202ENST00000321728 SYT15Q9BQS2 421 aa19.06■□□□□ 0.64
PRKCB-202ENST00000321728 CYP26A1O43174 497 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 SESN3P58005 492 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 CAV1Q03135 178 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 STAT4Q14765 748 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 SLC47A2Q86VL8 602 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■■■ 75.6
PRKCB-202ENST00000321728 PSPC1Q8WXF1 523 aaKnown RBP19.05■□□□□ 0.64
PRKCB-202ENST00000321728 DYDC2Q96IM9 177 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 GAKO14976 1311 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 POTEJP0CG39 1038 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 GZMAP12544 262 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 HOXA13P31271 388 aaPredicted RBP19.05■□□□□ 0.64
PRKCB-202ENST00000321728 GRK7Q8WTQ7 553 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 TEKT4Q8WW24 435 aa19.05■□□□□ 0.64
PRKCB-202ENST00000321728 SLC7A6OSQ96CW6 309 aaPredicted RBP19.05■□□□□ 0.64
PRKCB-202ENST00000321728 DENND2DQ9H6A0 471 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms