RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SLC16A4O15374 487 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 MCF2P10911 925 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 GRM5P41594 1212 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 MAPK7Q13164 816 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 CUL4AQ13619 759 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 FAM171A1Q5VUB5 890 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 DCLRE1AQ6PJP8 1040 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 CEP57Q86XR8 500 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 STAMQ92783 540 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 B3GALT6Q96L58 329 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 TARS2Q9BW92 718 aaKnown RBP19.48■□□□□ 0.71
TPM1-203ENST00000317516 PTPRHQ9HD43 1115 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 SLC38A7Q9NVC3 462 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 LARSQ9P2J5 1176 aaKnown RBP19.48■□□□□ 0.71
TPM1-203ENST00000317516 LIMD1Q9UGP4 676 aa19.48■□□□□ 0.71
TPM1-203ENST00000317516 TGM5O43548 720 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 TRAPPC3O43617 180 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 B3GAT3O94766 335 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 KIF4AO95239 1232 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 LONP1P36776 959 aaKnown RBP19.47■□□□□ 0.71
TPM1-203ENST00000317516 SLC12A3P55017 1021 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 RAD51AP2Q09MP3 1159 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 NAB2Q15742 525 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 MPZL3Q6UWV2 235 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 HASPINQ8TF76 798 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 DDX27Q96GQ7 796 aaKnown RBP19.47■□□□□ 0.71
TPM1-203ENST00000317516 ACAP3Q96P50 834 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 CDT1Q9H211 546 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
TPM1-203ENST00000317516 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 TMEM189-UBE2V1I3L0A0 370 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 LILRA6Q6PI73 481 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 FBXL6Q8N531 539 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 PIK3R5Q8WYR1 880 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 PPP1R10Q96QC0 940 aaKnown RBP19.46■□□□□ 0.71
TPM1-203ENST00000317516 PIDD1Q9HB75 910 aa19.46■□□□□ 0.71
TPM1-203ENST00000317516 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 TOM1L1O75674 476 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 BRD1O95696 1058 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 SPATA31D3P0C874 917 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 RPL17P18621 184 aaKnown RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 SCP2P22307 547 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 OSTNP61366 133 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 SF3A1Q15459 793 aaKnown RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 PSMD5Q16401 504 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 GLRA4Q5JXX5 417 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 PRSS55Q6UWB4 352 aaPredicted RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 ZPBP2Q6X784 338 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 SPATA31D4Q6ZUB0 917 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 TAS1R3Q7RTX0 852 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 TMEM161BQ8NDZ6 487 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 LNX1Q8TBB1 728 aaPredicted RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 SMG7Q92540 1137 aaKnown RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 PRRX2Q99811 253 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 CXCL16Q9H2A7 254 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 WDR6Q9NNW5 1121 aaKnown RBP19.45■□□□□ 0.7
TPM1-203ENST00000317516 ODF2LQ9ULJ1 636 aa19.45■□□□□ 0.7
TPM1-203ENST00000317516 MYBP10242 640 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 PROZP22891 400 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 CLCNKBP51801 687 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 UPP1Q16831 310 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 XKR4Q5GH76 650 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 ALKAL1Q6UXT8 129 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 CEP120Q8N960 986 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 ASIC4Q96FT7 647 aa19.44■□□□□ 0.7
TPM1-203ENST00000317516 CLDN3O15551 220 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 RFPL2O75678 378 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 MAPTP10636 758 aaKnown RBP19.43■□□□□ 0.7
TPM1-203ENST00000317516 LIN9Q5TKA1 542 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 CLSTN3Q9BQT9 956 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 PRKD2Q9BZL6 878 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 TECTAO75443 2155 aa19.43■□□□□ 0.7
TPM1-203ENST00000317516 ZMYND10O75800 440 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 PAPLNO95428 1278 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 ASGR2P07307 311 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 HARSP12081 509 aaKnown RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 KCNE1P15382 129 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 FGFR3P22607 806 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 GBP2P32456 591 aaPredicted RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 RPL9P32969 192 aaKnown RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 ABCD1P33897 745 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 MATR3P43243 847 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-203ENST00000317516 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 NOLC1Q14978 699 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-203ENST00000317516 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 ANKS3Q6ZW76 656 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 GPBP1Q86WP2 473 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 MYCT1Q8N699 235 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 BICD1Q96G01 975 aa19.42■□□□□ 0.7
TPM1-203ENST00000317516 INTS4Q96HW7 963 aaKnown RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 ZBTB45Q96K62 511 aaPredicted RBP19.42■□□□□ 0.7
TPM1-203ENST00000317516 SNX27Q96L92 541 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms