RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 NDST4Q9H3R1 872 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
HNF4A-202ENST00000316673 TTLL13PA6NNM8 815 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 NPTXRO95502 500 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 LDHAP00338 332 aaKnown RBP16.75■□□□□ 0.27
HNF4A-202ENST00000316673 EDN1P05305 212 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
HNF4A-202ENST00000316673 KCNA1Q09470 495 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 SHHQ15465 462 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
HNF4A-202ENST00000316673 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 MRPL10Q7Z7H8 261 aaKnown RBP16.75■□□□□ 0.27
HNF4A-202ENST00000316673 ECHDC2Q86YB7 292 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 TDHQ8IZJ6 230 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 CCDC112Q8NEF3 446 aa16.75■□□□□ 0.27
HNF4A-202ENST00000316673 A0A0B4J269 797 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 CLIC2O15247 247 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 STX10O60499 249 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 CETN1Q12798 172 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 EEF1DP3Q658K8 133 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 CNGA4Q8IV77 575 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 POMGNT1Q8WZA1 660 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 PCMTD1Q96MG8 357 aaPredicted RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 EIF2AQ9BY44 585 aaKnown RBP16.74■□□□□ 0.27
HNF4A-202ENST00000316673 CDT1Q9H211 546 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 IPPQ9Y573 584 aa16.74■□□□□ 0.27
HNF4A-202ENST00000316673 ABLIM1O14639 778 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 OGTO15294 1046 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ITGA4P13612 1032 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 GRM5P41594 1212 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CYP2J2P51589 502 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ENPEPQ07075 957 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CHRDL2Q6WN34 429 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ZNF598Q86UK7 904 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CDR2LQ86X02 465 aaPredicted RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 MSTO1Q9BUK6 570 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 DMAC2Q9NW81 257 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CXXC1Q9P0U4 656 aaPredicted RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 AGO2Q9UKV8 859 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ANKRD63C9JTQ0 380 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 N4BP1O75113 896 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 AFPP02771 609 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CLTAP09496 248 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 DEFB103AP81534 67 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 SLC39A4Q6P5W5 647 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ZBTB33Q86T24 672 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ABI1Q8IZP0 508 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 CRIPAKQ8N1N5 446 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 SMG8Q8ND04 991 aaKnown RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ZBTB45Q96K62 511 aaPredicted RBP16.73■□□□□ 0.27
HNF4A-202ENST00000316673 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
HNF4A-202ENST00000316673 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
HNF4A-202ENST00000316673 TEX33O43247 280 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 AKAP3O75969 853 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 GJB5O95377 273 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 TRIM21P19474 475 aaKnown RBP16.72■□□□□ 0.27
HNF4A-202ENST00000316673 ADSSP30520 456 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 PBX1P40424 430 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 TCERG1LQ5VWI1 586 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 GLB1LQ6UWU2 654 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 ZSCAN30Q86W11 494 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 ACAP3Q96P50 834 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 NXF3Q9H4D5 531 aaKnown RBP16.72■□□□□ 0.27
HNF4A-202ENST00000316673 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 INSL6Q9Y581 213 aa16.72■□□□□ 0.27
HNF4A-202ENST00000316673 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 ATF7P17544 494 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 DCAF17Q5H9S7 520 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 FIGNQ5HY92 759 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 CD302Q8IX05 232 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms