RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 CDT1Q9H211 546 aa17.03■□□□□ 0.32
CALR-201ENST00000316448 APEX2Q9UBZ4 518 aa17.03■□□□□ 0.32
CALR-201ENST00000316448 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
CALR-201ENST00000316448 SMIM35A0A1B0GVV1 85 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 OGTO15294 1046 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 ARF4P18085 180 aaPredicted RBP17.02■□□□□ 0.32
CALR-201ENST00000316448 HOXC8P31273 242 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 GTF2H1P32780 548 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 ENPEPQ07075 957 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 ASIC2Q16515 512 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
CALR-201ENST00000316448 OR5B17Q8NGF7 314 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 DNAJB3Q8WWF6 145 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
CALR-201ENST00000316448 CPSF3Q9UKF6 684 aaKnown RBP17.02■□□□□ 0.32
CALR-201ENST00000316448 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.32
CALR-201ENST00000316448 FOXN3O00409 490 aaPredicted RBP17.02■□□□□ 0.31
CALR-201ENST00000316448 VNN1O95497 513 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 KIF5AQ12840 1032 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 ARHGAP44Q17R89 818 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 TDRD10Q5VZ19 366 aaKnown RBP17.02■□□□□ 0.31
CALR-201ENST00000316448 ZNF571Q7Z3V5 609 aaPredicted RBP17.02■□□□□ 0.31
CALR-201ENST00000316448 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 THNSL1Q8IYQ7 743 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 OLIG1Q8TAK6 271 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 TATDN2Q93075 761 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 KREMEN1Q96MU8 473 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 PI4K2AQ9BTU6 479 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 CARD6Q9BX69 1037 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 PDZD7Q9H5P4 517 aa17.02■□□□□ 0.31
CALR-201ENST00000316448 UBE2TQ9NPD8 197 aaPredicted RBP17.02■□□□□ 0.31
CALR-201ENST00000316448 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.02■□□□□ 0.317e-18■□□□□ 9.1
CALR-201ENST00000316448 V9GYY5 206 aaPredicted RBP17.02■□□□□ 0.31
CALR-201ENST00000316448 EFCAB8A8MWE9 144 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 F8VZ95 297 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 PJA2O43164 708 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 TSPAN1O60635 241 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 RARBP10826 455 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 PRKCIP41743 596 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 OSTNP61366 133 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 AMPD2Q01433 879 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 GFPT1Q06210 699 aaPredicted RBP17.01■□□□□ 0.31
CALR-201ENST00000316448 ELF2Q15723 593 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 ZNF568Q3ZCX4 644 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 ZACNQ401N2 412 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 CCSAPQ6IQ19 270 aaPredicted RBP17.01■□□□□ 0.31
CALR-201ENST00000316448 MNS1Q8NEH6 495 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 KLHDC9Q8NEP7 349 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
CALR-201ENST00000316448 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 CDC23Q9UJX2 597 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 DAAM1Q9Y4D1 1078 aa17.01■□□□□ 0.31
CALR-201ENST00000316448 C17orf102A2RUQ5 167 aa17■□□□□ 0.31
CALR-201ENST00000316448 ZEB2O60315 1214 aa17■□□□□ 0.31
CALR-201ENST00000316448 GFPT2O94808 682 aa17■□□□□ 0.31
CALR-201ENST00000316448 TNNI1P19237 187 aa17■□□□□ 0.31
CALR-201ENST00000316448 PTK2Q05397 1052 aa17■□□□□ 0.31
CALR-201ENST00000316448 KLHL30Q0D2K2 578 aa17■□□□□ 0.31
CALR-201ENST00000316448 SLC18A3Q16572 532 aa17■□□□□ 0.31
CALR-201ENST00000316448 NBPF20Q3BBV1 942 aa17■□□□□ 0.31
CALR-201ENST00000316448 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
CALR-201ENST00000316448 ZNF410Q86VK4 478 aa17■□□□□ 0.31
CALR-201ENST00000316448 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
CALR-201ENST00000316448 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
CALR-201ENST00000316448 HELQQ8TDG4 1101 aa17■□□□□ 0.31
CALR-201ENST00000316448 ZNF296Q8WUU4 475 aaPredicted RBP17■□□□□ 0.31
CALR-201ENST00000316448 FNBP1Q96RU3 617 aa17■□□□□ 0.31
CALR-201ENST00000316448 CGRRF1Q99675 332 aa17■□□□□ 0.31
CALR-201ENST00000316448 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
CALR-201ENST00000316448 GINS2Q9Y248 185 aa17■□□□□ 0.31
CALR-201ENST00000316448 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
CALR-201ENST00000316448 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
CALR-201ENST00000316448 HTTP42858 3142 aa17■□□□□ 0.31
CALR-201ENST00000316448 SOX5P35711 763 aa17■□□□□ 0.31
CALR-201ENST00000316448 CETN1Q12798 172 aa17■□□□□ 0.31
CALR-201ENST00000316448 TMEM132AQ24JP5 1023 aa17■□□□□ 0.31
CALR-201ENST00000316448 SRGAP1Q7Z6B7 1085 aa17■□□□□ 0.31
CALR-201ENST00000316448 TMEM40Q8WWA1 233 aa17■□□□□ 0.31
CALR-201ENST00000316448 OSMRQ99650 979 aa17■□□□□ 0.31
CALR-201ENST00000316448 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
CALR-201ENST00000316448 GRIN2DO15399 1336 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 A0A087X0T9 212 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 EVI5O60447 810 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 KPNA6O60684 536 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 HLA-DRAP01903 254 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 FAM228BP0C875 321 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 HOXD10P28358 340 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 HOXA11P31270 313 aaPredicted RBP16.99■□□□□ 0.31
CALR-201ENST00000316448 STAT1P42224 750 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 KCNA10Q16322 511 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 ERCC6LQ2NKX8 1250 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 TXLNBQ8N3L3 684 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
CALR-201ENST00000316448 WNT8BQ93098 351 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 SCLT1Q96NL6 688 aa16.99■□□□□ 0.31
CALR-201ENST00000316448 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms