RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 LAMC1P11047 1609 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 SYNMO15061 1565 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 NFKBIAP25963 317 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FHOD1Q9Y613 1164 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 NR3C1P04150 777 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 IFNA8P32881 189 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 RFC5P40937 340 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 GLYCTKQ8IVS8 523 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 COA7Q96BR5 231 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 DHX36Q9H2U1 1008 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 RAD51CO43502 376 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 KCNB1Q14721 858 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 TAF5Q15542 800 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 UTYO14607 1347 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FKBP9O95302 570 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 ALBP02768 609 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CIITAP33076 1130 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PI16Q6UXB8 463 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FKBP9P1Q75LS8 142 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 LPCAT2Q7L5N7 544 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 NLRP4Q96MN2 994 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 ZIM3Q96PE6 472 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CDYLQ9Y232 598 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PP2D1A8MPX8 630 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PSMA4P25789 261 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 GSSP48637 474 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 GPC5P78333 572 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PGBD4Q96DM1 585 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 OTUB1Q96FW1 271 aaPredicted RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 TMEM79Q9BSE2 394 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 GOLPH3Q9H4A6 298 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MYOM2P54296 1465 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 KDM5DQ9BY66 1539 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MIF4GDA9UHW6 222 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 KLK7P49862 253 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SESN2P58004 480 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 FUT11Q495W5 492 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 ARMCX4Q5H9R4 360 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SNX12Q9UMY4 172 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 IL2RBP14784 551 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 INAQ16352 499 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MYCBPAPQ8TBZ2 947 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SSH3Q8TE77 659 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SLC7A3Q8WY07 619 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MAP4K1Q92918 833 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 PDLIM2Q96JY6 352 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 ANO9A1A5B4 782 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CCZ1BP86790 482 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CCZ1P86791 482 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 PTK2BQ14289 1009 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 TRIM71Q2Q1W2 868 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 TRIM43BA6NCK2 446 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 GALNT17Q6IS24 598 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 WDR17Q8IZU2 1322 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 TOPBP1Q92547 1522 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 LRRC39Q96DD0 335 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 NSL1Q96IY1 281 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 YEATS2Q9ULM3 1422 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SRP72O76094 671 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 CCT3P49368 545 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 AKR1D1P51857 326 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CACNA2D1P54289 1103 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 NFIL3Q16649 462 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 RNF26Q9BY78 433 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 BTN3A3O00478 584 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 PTK7Q13308 1070 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CHI3L2Q15782 390 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 TCHHL1Q5QJ38 904 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 IFT43Q96FT9 208 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CEP170P1Q96L14 293 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 C9orf72Q96LT7 481 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 METTL5Q9NRN9 209 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 NDFIP2Q9NV92 336 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SERPINB13Q9UIV8 391 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 DTNAQ9Y4J8 743 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 H3BQF6 201 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CDH2P19022 906 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 SARSP49591 514 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 SAPCD2Q86UD0 394 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 PIGSQ96S52 555 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MOV10L1Q9BXT6 1211 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 MYL2P10916 166 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 FGFR3P22607 806 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 ZSWIM7Q19AV6 140 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 HEATR6Q6AI08 1181 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 TAS2R42Q7RTR8 314 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 ZFYVE1Q9HBF4 777 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 HNRNPRO43390 633 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 PDE8AO60658 829 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 ZNF23P17027 643 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MAPRE2Q15555 327 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 CERKLQ49MI3 558 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms