RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MED15Q96RN5 788 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 FMO2Q99518 471 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 PXMP2Q9NR77 195 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 BCL9O00512 1426 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 DHX9Q08211 1270 aaKnown RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 DCUN1D1Q96GG9 259 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 KLHL11Q9NVR0 708 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 BCAP29Q9UHQ4 241 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 SLC13A4Q9UKG4 626 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 PCDHB12Q9Y5F1 795 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 ODC1P11926 461 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 PI4K2AQ9BTU6 479 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 TRPV6Q9H1D0 765 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 IGFLR1Q9H665 355 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 SAYSD1Q9NPB0 183 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 ABHD10Q9NUJ1 306 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 KIAA0391O15091 583 aaKnown RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 IL1R1P14778 569 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 DBN1Q16643 649 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 TDRD10Q5VZ19 366 aaKnown RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 PID1Q7Z2X4 250 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 GPATCH11Q8N954 259 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 SETD4Q9NVD3 440 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 CHEK2O96017 543 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 POU5F1BQ06416 359 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 VGLL4Q14135 290 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 ZKSCAN8Q15776 578 aaPredicted RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 DCAF6Q58WW2 860 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 CATSPER3Q86XQ3 398 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 AGAP3Q96P47 875 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 EGFL8Q99944 293 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 INTS9Q9NV88 658 aaKnown RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 RSPH10B2B2RC85 870 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 BAG2O95816 211 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 RSPH10BP0C881 870 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 PCK1P35558 622 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 LRGUKQ96M69 825 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 PDXKO00764 312 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 CSDE1O75534 798 aaKnown RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 URODP06132 367 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 SLC7A14Q8TBB6 771 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 SOCS4Q8WXH5 440 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 MYMKA6NI61 221 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 ROR1Q01973 937 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 FBXO2Q9UK22 296 aaPredicted RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 GOLGA8KD6RF30 607 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 NUMBP49757 651 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
RFFL-201ENST00000315249 CCSER1Q9C0I3 900 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 ATP9BO43861 1147 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 EVI5O60447 810 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 GNGT1P63211 74 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 CEP120Q8N960 986 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 MYPNQ86TC9 1320 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 APOL1O14791 398 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 TWF1Q12792 350 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 OSMRQ99650 979 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 DPP3Q9NY33 737 aa14.29□□□□□ -0.12
RFFL-201ENST00000315249 CLTAP09496 248 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TMEM60Q9H2L4 133 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 H3BRB1 525 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 PPP1R12AO14974 1030 aaPredicted RBP14.28□□□□□ -0.12
RFFL-201ENST00000315249 GSTA4O15217 222 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ZNF484Q5JVG2 852 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 USP33Q8TEY7 942 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 DNAJB3Q8WWF6 145 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TUT1Q9H6E5 874 aaKnown RBP14.28□□□□□ -0.12
RFFL-201ENST00000315249 ANKEF1Q9NU02 776 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 CLCA2Q9UQC9 943 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 MSH4O15457 936 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ARP10275 920 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 SCP2P22307 547 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ARL4DP49703 201 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 PTF1AQ7RTS3 328 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 MYRIPQ8NFW9 859 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ULK4Q96C45 1275 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 NCAM1P13591 858 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 OCRLQ01968 901 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 NR2E3Q9Y5X4 410 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 SYNDIG1LA6NDD5 238 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 TAC1P20366 129 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 ERVK-24P63145 666 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 GPS1Q13098 491 aa14.28□□□□□ -0.12
RFFL-201ENST00000315249 GTF2H3Q13889 308 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms