RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TRAPPC10P48553 1259 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 TUSC3Q13454 348 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 PRPF4BQ13523 1007 aaKnown RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 TDGQ13569 410 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 PDIA5Q14554 519 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 PPP2R5AQ15172 486 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 MAPK6Q16659 721 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 TTC38Q5R3I4 469 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 HAUS3Q68CZ6 603 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 CDCA2Q69YH5 1023 aaPredicted RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 FUT10Q6P4F1 479 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 POTEGQ6S5H5 508 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 SPATA31D4Q6ZUB0 917 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 PALB2Q86YC2 1186 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 NOSTRINQ8IVI9 506 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 C4orf32Q8N8J7 132 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 DEPTORQ8TB45 409 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 FEZF2Q8TBJ5 459 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 RIN2Q8WYP3 895 aaPredicted RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 IFT74Q96LB3 600 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 RHOBTB2Q9BYZ6 727 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 FNIP2Q9P278 1114 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 IGSF9Q9P2J2 1179 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 LRWD1Q9UFC0 647 aa8.99□□□□□ -0.97
TPM3-203ENST00000312970 NOL7Q9UMY1 257 aaKnown RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
TPM3-203ENST00000312970 CHD6Q8TD26 2715 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 CEP250Q9BV73 2442 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 PRR23AA6NEV1 266 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 HAX1O00165 279 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 PRKCBP05771 671 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 MYBP10242 640 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 LIG1P18858 919 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 CCT6AP40227 531 aaKnown RBP8.98□□□□□ -0.97
TPM3-203ENST00000312970 ABL2P42684 1182 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 FXR2P51116 673 aaKnown RBP eCLIP8.98□□□□□ -0.972e-6■■■□□ 15.5
TPM3-203ENST00000312970 CLCN5P51795 746 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 EFNA5P52803 228 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 CREMQ03060 361 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
TPM3-203ENST00000312970 ASTLQ6HA08 431 aaPredicted RBP8.98□□□□□ -0.97
TPM3-203ENST00000312970 LILRA6Q6PI73 481 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 SND1Q7KZF4 910 aaKnown RBP eCLIP8.98□□□□□ -0.97
TPM3-203ENST00000312970 ERMP1Q7Z2K6 904 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 TMC2Q8TDI7 906 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 BSNDQ8WZ55 320 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 STAMQ92783 540 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 KIFAP3Q92845 792 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 B3GALT6Q96L58 329 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 ADPGKQ9BRR6 497 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 MFSD1Q9H3U5 465 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 SMOC2Q9H3U7 446 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 PDZD7Q9H5P4 517 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 KCNK12Q9HB15 430 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 WDR6Q9NNW5 1121 aaKnown RBP8.98□□□□□ -0.97
TPM3-203ENST00000312970 ZDHHC7Q9NXF8 308 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 SNTG2Q9NY99 539 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
TPM3-203ENST00000312970 C2orf16Q68DN1 1984 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 SPTBN2O15020 2390 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 K7ERI5 159 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 TGM5O43548 720 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 GALR2O43603 387 aaPredicted RBP8.97□□□□□ -0.97
TPM3-203ENST00000312970 RFPL2O75678 378 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 PAPLNO95428 1278 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 U2AF2P26368 475 aaKnown RBP eCLIP8.97□□□□□ -0.975e-7■■■■□ 22.9
TPM3-203ENST00000312970 GBP2P32456 591 aaPredicted RBP8.97□□□□□ -0.97
TPM3-203ENST00000312970 PTGDRQ13258 359 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 ECM1Q16610 540 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 GLYCTKQ8IVS8 523 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 SMG7Q92540 1137 aaKnown RBP8.97□□□□□ -0.97
TPM3-203ENST00000312970 NXPE3Q969Y0 559 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 ZNF707Q96C28 371 aaPredicted RBP8.97□□□□□ -0.97
TPM3-203ENST00000312970 KIF2CQ99661 725 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 PAAF1Q9BRP4 392 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 TTPALQ9BTX7 342 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 RAB34Q9BZG1 259 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 CCDC113Q9H0I3 377 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 NT5C3AQ9H0P0 336 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 BHMT2Q9H2M3 363 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 POLD4Q9HCU8 107 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.97□□□□□ -0.973e-11■□□□□ 9
TPM3-203ENST00000312970 DNM3Q9UQ16 869 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 ACACBO00763 2458 aa8.97□□□□□ -0.97
TPM3-203ENST00000312970 SF3B1O75533 1304 aaKnown RBP eCLIP8.97□□□□□ -0.977e-7■■■■■ 108.6
TPM3-203ENST00000312970 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.97
TPM3-203ENST00000312970 CASTOR2A6NHX0 329 aa8.96□□□□□ -0.98
TPM3-203ENST00000312970 LAD1O00515 517 aa8.96□□□□□ -0.98
TPM3-203ENST00000312970 PTGESO14684 152 aa8.96□□□□□ -0.98
TPM3-203ENST00000312970 N4BP1O75113 896 aaKnown RBP8.96□□□□□ -0.98
TPM3-203ENST00000312970 RECQL4O94761 1208 aa8.96□□□□□ -0.98
TPM3-203ENST00000312970 RPL17P18621 184 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms