RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ACAD10Q6JQN1 1059 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 MAP4K3Q8IVH8 894 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 MGARPQ8TDB4 240 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 CHMP6Q96FZ7 201 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 CCDC114Q96M63 670 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 JPH2Q9BR39 696 aaPredicted RBP27.13■■□□□ 1.93
HOXB3-201ENST00000311626 CREB1P16220 341 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 HSPA6P17066 643 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 MAPK4P31152 587 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 GPC3P51654 580 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 KRT17Q04695 432 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 CYP24A1Q07973 514 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 TCEAL1Q15170 157 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 SGO2Q562F6 1265 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 ART4Q93070 314 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 ST6GALNAC4Q9H4F1 302 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 SRRM3A6NNA2 597 aaPredicted RBP27.12■■□□□ 1.93
HOXB3-201ENST00000311626 HNRNPDLO14979 420 aaKnown RBP27.12■■□□□ 1.93
HOXB3-201ENST00000311626 PRUNE1Q86TP1 453 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 PASD1Q8IV76 773 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 TEX2Q8IWB9 1127 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 ZNF516Q92618 1163 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 EXOC7Q9UPT5 735 aa27.12■■□□□ 1.93
HOXB3-201ENST00000311626 ZNFX1Q9P2E3 1918 aaKnown RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 ECEL1O95672 775 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 RRM1P23921 792 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 GJC1P36383 396 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 LRRC14Q15048 493 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 GKAP1Q5VSY0 366 aaPredicted RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 SWSAP1Q6NVH7 229 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 LRRC34Q8IZ02 419 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 TTLL6Q8N841 843 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 ATXN2LQ8WWM7 1075 aaKnown RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 MLXIPLQ9NP71 852 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 ASIC3Q9UHC3 531 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 WDR46O15213 610 aaKnown RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 MMP13P45452 471 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 CLEC16AQ2KHT3 1053 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 CYFIP1Q7L576 1253 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 VTI1AQ96AJ9 217 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 ATG4CQ96DT6 458 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 PGM2Q96G03 612 aa27.11■■□□□ 1.93
HOXB3-201ENST00000311626 RPAP3Q9H6T3 665 aaPredicted RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 CNOT10Q9H9A5 744 aaKnown RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 R3HDM2Q9Y2K5 976 aaKnown RBP27.11■■□□□ 1.93
HOXB3-201ENST00000311626 PASKQ96RG2 1323 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 RASGRF2O14827 1237 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 GJB6O95452 261 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 SCP2P22307 547 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 CYP1B1Q16678 543 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 CTNNAL1Q9UBT7 734 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 C5orf60A6NFR6 353 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 TP73O15350 636 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 AUHQ13825 339 aaKnown RBP27.1■■□□□ 1.93
HOXB3-201ENST00000311626 CLUL1Q15846 466 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 SCARA3Q6AZY7 606 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 PLCD3Q8N3E9 789 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 IWS1Q96ST2 819 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 AAASQ9NRG9 546 aa27.1■■□□□ 1.93
HOXB3-201ENST00000311626 MAPK13O15264 365 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 GGPS1O95749 300 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 CXCL9Q07325 125 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 ANKRD20A8PQ5CZ79 823 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 SPDYCQ5MJ68 293 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 MFSD14AQ96MC6 490 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 CDC42EP4Q9H3Q1 356 aaKnown RBP27.09■■□□□ 1.93
HOXB3-201ENST00000311626 INTS9Q9NV88 658 aaKnown RBP27.09■■□□□ 1.93
HOXB3-201ENST00000311626 COQ4Q9Y3A0 265 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 FAM83AQ86UY5 434 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 ZNF317Q96PQ6 595 aaPredicted RBP27.09■■□□□ 1.93
HOXB3-201ENST00000311626 MOV10L1Q9BXT6 1211 aaKnown RBP27.09■■□□□ 1.93
HOXB3-201ENST00000311626 SLC40A1Q9NP59 571 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 HAUS2Q9NVX0 235 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 UVRAGQ9P2Y5 699 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 LOXHD1Q8IVV2 1947 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 MROH7Q68CQ1 1323 aa27.09■■□□□ 1.93
HOXB3-201ENST00000311626 ACOT2P49753 483 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 JAK3P52333 1124 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 CALCOCO2Q13137 446 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 C6orf118Q5T5N4 469 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 TAS1R3Q7RTX0 852 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 NLRX1Q86UT6 975 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 KIFAP3Q92845 792 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 CD248Q9HCU0 757 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 SEPT9Q9UHD8 586 aaPredicted RBP27.08■■□□□ 1.93
HOXB3-201ENST00000311626 VIMP08670 466 aaKnown RBP27.08■■□□□ 1.93
HOXB3-201ENST00000311626 RARGP13631 454 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 TMEM174Q8WUU8 243 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 ELAC2Q9BQ52 826 aaKnown RBP27.08■■□□□ 1.93
HOXB3-201ENST00000311626 ANKEF1Q9NU02 776 aa27.08■■□□□ 1.93
HOXB3-201ENST00000311626 PARP2Q9UGN5 583 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 GGT7Q9UJ14 662 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 GGA2Q9UJY4 613 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 PCDHA10Q9Y5I2 948 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 IBSPP21815 317 aaPredicted RBP27.07■■□□□ 1.92
HOXB3-201ENST00000311626 CDR1P51861 262 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 KRT76Q01546 638 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 ADCY1Q08828 1119 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 MCOLN2Q8IZK6 566 aa27.07■■□□□ 1.92
HOXB3-201ENST00000311626 XPNPEP1Q9NQW7 623 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms