RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 THAP11Q96EK4 314 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 APOA1P02647 267 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 SLC29A2Q14542 456 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 TBC1D23Q9NUY8 699 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 TMEM260Q9NX78 707 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 USP31Q70CQ4 1352 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 STAT3P40763 770 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 PAPD7Q5XG87 772 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 KCNB2Q92953 911 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 ENO4A6NNW6 628 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNED1-201ENST00000310397 ARHGEF9O43307 516 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SNX2O60749 519 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SEC24CP53992 1094 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 STK4Q13043 487 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 C16orf89Q6UX73 402 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 DNAJC7Q99615 494 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 TOPORSQ9NS56 1045 aaPredicted RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 PDP2Q9P2J9 529 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 APOL1O14791 398 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 TRIM49P0CI25 452 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 TRIM49CP0CI26 452 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 OSBPP22059 807 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 ZNF200P98182 395 aaPredicted RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 CYLC2Q14093 348 aaPredicted RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 TRIM51Q9BSJ1 452 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 H0Y626 953 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 IGF2BP3O00425 579 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNED1-201ENST00000310397 TRIM16O95361 564 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 GPC3P51654 580 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 PSMC5P62195 406 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 DTX3LQ8TDB6 740 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 MYH11P35749 1972 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 CDH6P55285 790 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 INPP5AQ14642 412 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 FIGNQ5HY92 759 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 SULF1Q8IWU6 871 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 MRPL1Q9BYD6 325 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 WDR35Q9P2L0 1181 aa13.89□□□□□ -0.19
SNED1-201ENST00000310397 CLTCQ00610 1675 aaKnown RBP13.89□□□□□ -0.19
SNED1-201ENST00000310397 TMEM247A6NEH6 219 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 TBX3O15119 743 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 CCNYL1Q8N7R7 359 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 RWDD4Q6NW29 188 aaKnown RBP13.88□□□□□ -0.19
SNED1-201ENST00000310397 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 SETD3Q86TU7 594 aaPredicted RBP13.88□□□□□ -0.19
SNED1-201ENST00000310397 OR6B3Q8NGW1 331 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 THTPAQ9BU02 230 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 CCDC134Q9H6E4 229 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 NPR1P16066 1061 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 NFKBIAP25963 317 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 FNTAP49354 379 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 NPHP4O75161 1426 aaPredicted RBP13.88□□□□□ -0.19
SNED1-201ENST00000310397 E7ENQ6 273 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 NDUFA13Q9P0J0 144 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 APRTP07741 180 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 PHKA2P46019 1235 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
SNED1-201ENST00000310397 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 PRUNE1Q86TP1 453 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 ZNF341Q9BYN7 854 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 OSBPL8Q9BZF1 889 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 BLOC1S6Q9UL45 172 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 ESRRBO95718 433 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 KRT16P08779 473 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 IFNA8P32881 189 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 STX3Q13277 289 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 SCARF1Q14162 830 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 FAM102AQ5T9C2 384 aaPredicted RBP13.88□□□□□ -0.19
SNED1-201ENST00000310397 TPCN2Q8NHX9 752 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 KIF17Q9P2E2 1029 aa13.88□□□□□ -0.19
SNED1-201ENST00000310397 SCTRP47872 440 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 KYAT1Q16773 422 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 QRICH1Q2TAL8 776 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 NSL1Q96IY1 281 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 FRMD8Q9BZ67 464 aaPredicted RBP13.87□□□□□ -0.19
SNED1-201ENST00000310397 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
SNED1-201ENST00000310397 CENPCQ03188 943 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms