RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FZD9O00144 591 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 EIF3HO15372 352 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS41-202ENST00000310301 ABL1P00519 1130 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 HNRNPH1P31943 449 aaKnown RBP8.67□□□□□ -1.02
VPS41-202ENST00000310301 SERPINB10P48595 397 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 ERFP50548 548 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SLC44A4Q53GD3 710 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 CDC26Q8NHZ8 85 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 RASGRP4Q8TDF6 673 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 EXT2Q93063 718 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 FAF2Q96CS3 445 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 GCOM2Q9BZD3 368 aaPredicted RBP8.67□□□□□ -1.02
VPS41-202ENST00000310301 MSRAQ9UJ68 235 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 RRN3P2A6NIE6 340 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 MMP1P03956 469 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
VPS41-202ENST00000310301 PHKA2P46019 1235 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 ARL4CP56559 192 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 VSNL1P62760 191 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 VGLL4Q14135 290 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
VPS41-202ENST00000310301 KLC3Q6P597 504 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 GRAMD1AQ96CP6 724 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 PDLIM2Q96JY6 352 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SH3GLB2Q9NR46 395 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SRPRBQ9Y5M8 271 aaKnown RBP8.67□□□□□ -1.02
VPS41-202ENST00000310301 NRXN3Q9Y4C0 1643 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SLC15A5A6NIM6 579 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 PPP1R37O75864 691 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 MYL1P05976 194 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 MED21Q13503 144 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 CNGA3Q16281 694 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SPATA21Q7Z572 469 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 SLC44A5Q8NCS7 719 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 KLC2Q9H0B6 622 aa8.67□□□□□ -1.02
VPS41-202ENST00000310301 MAFGO15525 162 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 CDC25AP30304 524 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 LRRC36Q1X8D7 754 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 ADCK1Q86TW2 530 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 NAF1Q96HR8 494 aaKnown RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 CCT8L2Q96SF2 557 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SMARCAD1Q9H4L7 1026 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SYNGAP1Q96PV0 1343 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TCP11X1B4DZS4 312 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 GOLGA8MH3BSY2 632 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 NFKBIEO00221 500 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 GAP43P17677 238 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 CCND1P24385 295 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SERPINB4P48594 390 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 MORF4L2Q15014 288 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SPRYD7Q5W111 196 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 PDXDC1Q6P996 788 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 BTNL9Q6UXG8 535 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 CATSPER1Q8NEC5 780 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 COG4Q9H9E3 785 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 KIF9Q9HAQ2 790 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 OLA1Q9NTK5 396 aaKnown RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 KIF17Q9P2E2 1029 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 ARHGAP26Q9UNA1 814 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 ATP8B3O60423 1300 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TARSL2A2RTX5 802 aaKnown RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 ESRRBO95718 433 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SLC4A1P02730 911 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 CYP21A2P08686 494 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TAC1P20366 129 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 HIC1Q14526 733 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 EFTUD2Q15029 972 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■■■■■ 30.5
VPS41-202ENST00000310301 ZBTB10Q96DT7 871 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 PIDD1Q9HB75 910 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 CD248Q9HCU0 757 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TOPORSQ9NS56 1045 aaPredicted RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 GTSE1Q9NYZ3 720 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 FBXL5Q9UKA1 691 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 GRID2IPA4D2P6 1211 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 HOXA2O43364 376 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 NR5A1Q13285 461 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 ANGPTL8Q6UXH0 198 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 C3orf67Q6ZVT6 689 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 RHOT2Q8IXI1 618 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 ANKRD7Q92527 254 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 TMEM39AQ9NV64 488 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
VPS41-202ENST00000310301 ARL2BPQ9Y2Y0 163 aa8.66□□□□□ -1.02
VPS41-202ENST00000310301 MAGEB2O15479 319 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 ZBED1O96006 694 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 UBTFL6P0CB48 400 aaPredicted RBP8.65□□□□□ -1.02
VPS41-202ENST00000310301 GRK4P32298 578 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 HSPA9P38646 679 aaKnown RBP8.65□□□□□ -1.02
VPS41-202ENST00000310301 ARL4AP40617 200 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 OAZ1P54368 228 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 CAV1Q03135 178 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 KLHL38Q2WGJ6 581 aa8.65□□□□□ -1.02
VPS41-202ENST00000310301 RABGAP1LQ5R372 815 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms