RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 RWDD2BP57060 319 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 C6orf89Q6UWU4 347 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 C15orf39Q6ZRI6 1047 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 MICALCLQ6ZW33 695 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 MDM1Q8TC05 714 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 ART4Q93070 314 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 SEMA4AQ9H3S1 761 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 AZI2Q9H6S1 392 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
SPIRE1-201ENST00000309836 C5orf60A6NFR6 353 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 CLDN3O15551 220 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 RXRBP28702 533 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 FNTAP49354 379 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 WNT7BP56706 349 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PRKCEQ02156 737 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 GCNT1Q02742 428 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 ENPEPQ07075 957 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 TNFAIP1Q13829 316 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 C3orf20Q8ND61 904 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 TRIM7Q9C029 511 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 ARHGAP28Q9P2N2 729 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PTPN22Q9Y2R2 807 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 FSCN2O14926 492 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 SORBS3O60504 671 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PSAPP07602 524 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 FDX1P10109 184 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 UNGP13051 313 aaPredicted RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 RTP1P59025 263 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 BYSLQ13895 437 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 SNRNP48Q6IEG0 339 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 YTHDF3Q7Z739 585 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 CCDC60Q8IWA6 550 aaPredicted RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 MCOLN2Q8IZK6 566 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 OTUD6BQ8N6M0 293 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 PGM2Q96G03 612 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 RUNDC3BQ96NL0 473 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 LRRC19Q9H756 370 aa16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 CNOT10Q9H9A5 744 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 MTRF1LQ9UGC7 380 aaKnown RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 SEPT9Q9UHD8 586 aaPredicted RBP16.29■□□□□ 0.2
SPIRE1-201ENST00000309836 MROH7Q68CQ1 1323 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 DGAT1O75907 488 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 FGFR4P22455 802 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 SP4Q02446 784 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 LLGL1Q15334 1064 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 ENOSF1Q7L5Y1 443 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 MCPH1Q8NEM0 835 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 C1orf54Q8WWF1 131 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 BICD1Q96G01 975 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 TMEM109Q9BVC6 243 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 ADAM7Q9H2U9 754 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 ATP6V0A4Q9HBG4 840 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 ANAPC7Q9UJX3 599 aa16.28■□□□□ 0.2
SPIRE1-201ENST00000309836 NFASCO94856 1347 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 EXTL3O43909 919 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 FSBPO95073 299 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 DRD4P21917 467 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 MAPK4P31152 587 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 BACE1P56817 501 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 ACTR2P61160 394 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 IFI35P80217 286 aaPredicted RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 IFT88Q13099 833 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 LLGL2Q6P1M3 1020 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 PHLDB2Q86SQ0 1253 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 USP37Q86T82 979 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 UHMK1Q8TAS1 419 aaKnown RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 XPO6Q96QU8 1125 aaKnown RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 FAM129AQ9BZQ8 928 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 AVENQ9NQS1 362 aaPredicted RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
SPIRE1-201ENST00000309836 PTPRJQ12913 1337 aa16.27■□□□□ 0.19
SPIRE1-201ENST00000309836 TLDC2A0PJX2 215 aa16.27■□□□□ 0.19
SPIRE1-201ENST00000309836 SMIM23A6NLE4 172 aa16.27■□□□□ 0.19
SPIRE1-201ENST00000309836 TP73O15350 636 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms