RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MAGOHP61326 146 aaKnown RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 TAS1R3Q7RTX0 852 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 MSTO1Q9BUK6 570 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 RBBP6Q7Z6E9 1792 aaKnown RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 HMGB1P1B2RPK0 211 aaPredicted RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 GZMAP12544 262 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 SCP2P22307 547 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 GHRHRQ02643 423 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 TTC27Q6P3X3 843 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 ZDHHC14Q8IZN3 488 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 VTI1AQ96AJ9 217 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 TMBIM4Q9HC24 238 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 PNMA2Q9UL42 364 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 DIS3Q9Y2L1 958 aaKnown RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 MAFGO15525 162 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 PHF2O75151 1096 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 GJB6O95452 261 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 FGFR4P22455 802 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 RWDD2BP57060 319 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CATSPERGQ6ZRH7 1159 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 KLRG1Q96E93 195 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 HOXC10Q9NYD6 342 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 GTF3C4Q9UKN8 822 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 SHBGP04278 402 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CD58P19256 250 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 OSTNP61366 133 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CYFIP2Q96F07 1278 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CCDC114Q96M63 670 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 RASSF4Q9H2L5 321 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 CFHP08603 1231 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 POU5F1Q01860 360 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 DRP2Q13474 957 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 XRRA1Q6P2D8 792 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 KDM7AQ6ZMT4 941 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 NTPCRQ9BSD7 190 aaKnown RBP12.36□□□□□ -0.43
PTPN2-201ENST00000309660 WNT8AQ9H1J5 351 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
PTPN2-201ENST00000309660 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 MAPK13O15264 365 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 STBD1O95210 358 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 OATP04181 439 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 RARAP10276 462 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 SLC13A5Q86YT5 568 aaPredicted RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 C17orf75Q9HAS0 396 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 KLHL11Q9NVR0 708 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 FEZ2Q9UHY8 353 aaPredicted RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 EXTL3O43909 919 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 ATP4AP20648 1035 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 GLRA2P23416 452 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 CHRNA3P32297 505 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 LIG3P49916 1009 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 PEX5P50542 639 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 UBAP2Q5T6F2 1119 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 SCARA3Q6AZY7 606 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 ARHGAP28Q9P2N2 729 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 KIAA0391O15091 583 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 PMS2P54278 862 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms