RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 AFF1P51825 1210 aaKnown RBP21.61■■□□□ 1.05
VEGFB-201ENST00000309422 TCEAL5Q5H9L2 206 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 ARMCX5Q6P1M9 558 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 KRBA2Q6ZNG9 492 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 DDX53Q86TM3 631 aaKnown RBP21.61■■□□□ 1.05
VEGFB-201ENST00000309422 CD302Q8IX05 232 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 VPS52Q8N1B4 723 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 HLA-CQ95604 372 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 CDCA3Q99618 268 aaPredicted RBP21.61■■□□□ 1.05
VEGFB-201ENST00000309422 TLE6Q9H808 572 aa21.61■■□□□ 1.05
VEGFB-201ENST00000309422 SF3B1O75533 1304 aaKnown RBP eCLIP21.6■■□□□ 1.058e-15■■■■■ 253.5
VEGFB-201ENST00000309422 A0A0B4J269 797 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 KINO60870 393 aaKnown RBP21.6■■□□□ 1.05
VEGFB-201ENST00000309422 LDHAP00338 332 aaKnown RBP21.6■■□□□ 1.05
VEGFB-201ENST00000309422 FAM160A1Q05DH4 1040 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 ELAVL2Q12926 359 aaKnown RBP21.6■■□□□ 1.05
VEGFB-201ENST00000309422 PSMD2Q13200 908 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 GRAMD1CQ8IYS0 662 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 NOC3LQ8WTT2 800 aaKnown RBP21.6■■□□□ 1.05
VEGFB-201ENST00000309422 FAM212AQ96EL1 285 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 DDX27Q96GQ7 796 aaKnown RBP21.6■■□□□ 1.05
VEGFB-201ENST00000309422 TSPAN18Q96SJ8 248 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 CNTN3Q9P232 1028 aa21.6■■□□□ 1.05
VEGFB-201ENST00000309422 CHD7Q9P2D1 2997 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.59■■□□□ 1.05
VEGFB-201ENST00000309422 ABLIM1O14639 778 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 PTGESO14684 152 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 PRPF6O94906 941 aaKnown RBP21.59■■□□□ 1.05
VEGFB-201ENST00000309422 CXCL8P10145 99 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 GOLGA5Q8TBA6 731 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 EMILIN2Q9BXX0 1053 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 GOLPH3LQ9H4A5 285 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 RMND1Q9NWS8 449 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 MIOSQ9NXC5 875 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 ADAM28Q9UKQ2 775 aa21.59■■□□□ 1.05
VEGFB-201ENST00000309422 KIAA1671Q9BY89 1806 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 SMIM28A0A1B0GU29 152 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 TRAPPC3O43617 180 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 KCNE1P15382 129 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 GARTP22102 1010 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 CASP5P51878 434 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 SEZ6Q53EL9 994 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 ELMSAN1Q6PJG2 1045 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.58■■□□□ 1.042e-7■■□□□ 13.3
VEGFB-201ENST00000309422 GSTCDQ8NEC7 633 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 KIF12Q96FN5 646 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 IGFLR1Q9H665 355 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 MRPL17Q9NRX2 175 aaKnown RBP21.58■■□□□ 1.04
VEGFB-201ENST00000309422 CLDND1Q9NY35 253 aa21.58■■□□□ 1.04
VEGFB-201ENST00000309422 SMC2O95347 1197 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 SOD2P04179 222 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 RPN1P04843 607 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 CTSAP10619 480 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 DNAJB1P25685 340 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 CASP1P29466 404 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 IRS1P35568 1242 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 NDUFV1P49821 464 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 SNRPFP62306 86 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 CREMQ03060 361 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 TMEM173Q86WV6 379 aaPredicted RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 IPO9Q96P70 1041 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 PPP1R10Q96QC0 940 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 HERC2P3Q9BVR0 1158 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 STRA6Q9BX79 667 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 SLC39A2Q9NP94 309 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 CGNQ9P2M7 1197 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 UBQLN1Q9UMX0 589 aaKnown RBP21.57■■□□□ 1.04
VEGFB-201ENST00000309422 NUB1Q9Y5A7 615 aa21.57■■□□□ 1.04
VEGFB-201ENST00000309422 SPDYE4A6NLX3 237 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 ANKRD63C9JTQ0 380 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 B3GAT3O94766 335 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 IL18RAPO95256 599 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 NRIP1P48552 1158 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 GLUD2P49448 558 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 ERVFC1P60507 584 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 POU5F1Q01860 360 aaKnown RBP21.56■■□□□ 1.04
VEGFB-201ENST00000309422 KMT5BQ4FZB7 885 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 FUT10Q6P4F1 479 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 RBM23Q86U06 439 aaKnown RBP21.56■■□□□ 1.04
VEGFB-201ENST00000309422 BEST2Q8NFU1 509 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 HPS3Q969F9 1004 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 PABPC5Q96DU9 382 aaKnown RBP21.56■■□□□ 1.04
VEGFB-201ENST00000309422 ZBP1Q9H171 429 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 MARCH5Q9NX47 278 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 FAM50BQ9Y247 325 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 STYXL1Q9Y6J8 313 aa21.56■■□□□ 1.04
VEGFB-201ENST00000309422 FSCN2O14926 492 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 B4GALT3O60512 393 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 CXCL14O95715 111 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 RPL9P32969 192 aaKnown RBP21.55■■□□□ 1.04
VEGFB-201ENST00000309422 ACOT2P49753 483 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 USP41Q3LFD5 358 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 XKR4Q5GH76 650 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 SLC39A4Q6P5W5 647 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 PDXDC1Q6P996 788 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 PPFIBP1Q86W92 1011 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 NELFCDQ8IXH7 590 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
VEGFB-201ENST00000309422 GBP4Q96PP9 640 aa21.55■■□□□ 1.04
VEGFB-201ENST00000309422 FAM213AQ9BRX8 229 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms