RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 MAIP1Q8WWC4 291 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 KIFAP3Q92845 792 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SMC6Q96SB8 1091 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SLCO1B3Q9NPD5 702 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 PHTF1Q9UMS5 762 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 USH1CQ9Y6N9 552 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SLITRK3O94933 977 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 ALADP13716 330 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 KAZNQ674X7 775 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 C1orf186Q6ZWK4 172 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 AGGF1Q8N302 714 aaeCLIP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CBWD1Q9BRT8 395 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 FRMPD4Q14CM0 1322 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 F5H6K3 240 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 DCTN3O75935 186 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 ATP5HO75947 161 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CBX6O95503 412 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 EPHB2P29323 1055 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 MAN1A1P33908 653 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 POLGP54098 1239 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SYDE2Q5VT97 1194 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CCDC174Q6PII3 467 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 RNPEPL1Q9HAU8 725 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 NKX1-2Q9UD57 310 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 DCTN4Q9UJW0 460 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 CORO1CQ9ULV4 474 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 IGKV6D-41A0A0C4DH26 115 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 KIF3CO14782 793 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 TAC1P20366 129 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 NFIAQ12857 509 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 BLMHQ13867 455 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 RBBP5Q15291 538 aaKnown RBP11.87□□□□□ -0.51
PTPN7-201ENST00000309017 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 FYB2Q5VWT5 728 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 RNF43Q68DV7 783 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 LENG9Q96B70 501 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-201ENST00000309017 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■■■□ 23.6
PTPN7-201ENST00000309017 SH3GL3Q99963 347 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 SYT11Q9BT88 431 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 AAASQ9NRG9 546 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 VAV3Q9UKW4 847 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 ALAS1P13196 640 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CALB2P22676 271 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 FOXN2P32314 431 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CETN2P41208 172 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 NOVP48745 357 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 STAT4Q14765 748 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CCDC89Q8N998 374 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 PARD3BQ8TEW8 1205 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 ZNF483Q8TF39 744 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-201ENST00000309017 ZNF577Q9BSK1 485 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 LRRC19Q9H756 370 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 TUFT1Q9NNX1 390 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 GAKO14976 1311 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CALCAP01258 141 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 PRELPP51888 382 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 CAV1Q03135 178 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 MGAT5Q09328 741 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 DAB2IPQ5VWQ8 1189 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 VTI1AQ96AJ9 217 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 LXNQ9BS40 222 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 MOV10L1Q9BXT6 1211 aaKnown RBP11.87□□□□□ -0.51
PTPN7-201ENST00000309017 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 UVRAGQ9P2Y5 699 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 ZFP69BQ9UJL9 534 aa11.87□□□□□ -0.51
PTPN7-201ENST00000309017 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 IL1R1P14778 569 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 CYP1B1Q16678 543 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 OLIG1Q8TAK6 271 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 RBM17Q96I25 401 aaKnown RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 CFAP57Q96MR6 1250 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 MBOAT7Q96N66 472 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ZMYND8Q9ULU4 1186 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ZNF148Q9UQR1 794 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 STRCP1A6NGW2 1772 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms