RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DMTNQ08495 405 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 COG2Q14746 738 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 TMEM132BQ14DG7 1078 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CCDC158Q5M9N0 1113 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 ZSCAN25Q6NSZ9 544 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CCDC73Q6ZRK6 1079 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 C16orf59Q7L2K0 433 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CCDC186Q7Z3E2 898 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CREBRFQ8IUR6 639 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 KBTBD3Q8NAB2 608 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 SHCBP1Q8NEM2 672 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 REPS2Q8NFH8 660 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 BICD2Q8TD16 824 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 SDR42E1Q8WUS8 393 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 BRF1Q92994 677 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 DYNLL2Q96FJ2 89 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PGBD1Q96JS3 809 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PWWP2AQ96N64 755 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF830Q96NB3 372 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-201ENST00000308987 BPIFA3Q9BQP9 254 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 NAT10Q9H0A0 1025 aaKnown RBP5.54□□□□□ -1.52
CKS1B-201ENST00000308987 BOLA2Q9H3K6 86 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 CGNQ9P2M7 1197 aaKnown RBP5.54□□□□□ -1.52
CKS1B-201ENST00000308987 IMPACTQ9P2X3 320 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 PRDM4Q9UKN5 801 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 ADAMTS5Q9UNA0 930 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 TACC3Q9Y6A5 838 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 IVNS1ABPQ9Y6Y0 642 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 MYH15Q9Y2K3 1946 aa5.54□□□□□ -1.52
CKS1B-201ENST00000308987 WDR19Q8NEZ3 1342 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 MYADML2A6NDP7 307 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 GRXCR1A8MXD5 290 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 KIAA0355O15063 1070 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 PRKAB2O43741 272 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 STRNO43815 780 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 KINO60870 393 aaKnown RBP5.53□□□□□ -1.52
CKS1B-201ENST00000308987 PGK2P07205 417 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 PDE6AP16499 860 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 ZXDAP98168 799 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 EXOSC10Q01780 885 aaKnown RBP5.53□□□□□ -1.52
CKS1B-201ENST00000308987 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
CKS1B-201ENST00000308987 Q6ZUG5 572 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF589Q86UQ0 364 aaPredicted RBP5.53□□□□□ -1.52
CKS1B-201ENST00000308987 FERMT3Q86UX7 667 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 LUZP1Q86V48 1076 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 DRC7Q8IY82 874 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 CEP57L1Q8IYX8 460 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 LCORLQ8N3X6 602 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 NSUN7Q8NE18 718 aaKnown RBP5.53□□□□□ -1.52
CKS1B-201ENST00000308987 ENGASEQ8NFI3 743 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 VWCEQ96DN2 955 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 FGD4Q96M96 766 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 TANGO6Q9C0B7 1094 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 HOXC10Q9NYD6 342 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 OGFRQ9NZT2 677 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 CLIP2Q9UDT6 1046 aa5.53□□□□□ -1.52
CKS1B-201ENST00000308987 ZNF532Q9HCE3 1301 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 DMDP11532 3685 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 VPS13AQ96RL7 3174 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 A0A1W2PQ45 241 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 A0A1W2PQY0 241 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 SSU72P8A0A1W2PR75 194 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 KBTBD13C9JR72 458 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 NRDCO43847 1150 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 DHX16O60231 1041 aaKnown RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 PQBP1O60828 265 aaKnown RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 FLOT1O75955 427 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 YEATS4O95619 227 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 BPNT1O95861 308 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 SNAI1O95863 264 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ZFYP08048 801 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CYP21A2P08686 494 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CLTBP09497 229 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 TNNT1P13805 278 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 FOSL2P15408 326 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ZSCAN20P17040 1043 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 LIG3P49916 1009 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 GABPB1Q06547 395 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 PLS1Q14651 629 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ADALQ6DHV7 355 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 BRAPQ7Z569 592 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 MCATQ8IVS2 390 aaKnown RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 LRRC8AQ8IWT6 810 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CKAP2LQ8IYA6 745 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ABRAQ8N0Z2 381 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 SPC24Q8NBT2 197 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC112Q8NEF3 446 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 KLHDC9Q8NEP7 349 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 KCNG4Q8TDN1 519 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ASB16Q96NS5 453 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 TINF2Q9BSI4 451 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms