RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PCNX4Q63HM2 1172 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 RNF25Q96BH1 459 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 DCUN1D1Q96GG9 259 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 SART1O43290 800 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 ALDH2P05091 517 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 RPLP2P05387 115 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TAF6P49848 677 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 FBXW4P57775 412 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TMEM132BQ14DG7 1078 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 NAGPAQ9UK23 515 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 RNF40O75150 1001 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 LRRC8CQ8TDW0 803 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 NUF2Q9BZD4 464 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TTLL13PA6NNM8 815 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 FKBP1AP62942 108 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TSGA10IPQ3SY00 556 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 ARHGAP24Q8N264 748 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 RAB3IPQ96QF0 476 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TBK1Q9UHD2 729 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 LGALS16A8MUM7 142 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 H3BRB1 525 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 MSH4O15457 936 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TAP1Q03518 808 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TTC19Q6DKK2 380 aaPredicted RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 GUF1Q8N442 669 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 PDXKO00764 312 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 APOL1O14791 398 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CYP2C19P33261 490 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 BTG3Q14201 252 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 GRIK4Q16099 956 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 C18orf8Q96DM3 657 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ATP8A1Q9Y2Q0 1164 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 SLC26A4O43511 780 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 PNPLA4P41247 253 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CDH6P55285 790 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 B4GALNT4Q76KP1 1039 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 RAB42Q8N4Z0 105 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 OSMRQ99650 979 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 BEX3Q00994 111 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 DR1Q01658 176 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CENPUQ71F23 418 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 SLC7A14Q8TBB6 771 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 HTATIP2Q9BUP3 242 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 COL14A1Q05707 1796 aaKnown RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 RSPH10B2B2RC85 870 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 PALMO75781 387 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 THP07101 528 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 RSPH10BP0C881 870 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 FAM200BP0CF97 657 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 STX1BP61266 288 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 VPS39Q96JC1 886 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 EDEM3Q9BZQ6 932 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CASTOR2A6NHX0 329 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 PPP1R12AO14974 1030 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 TOM1L1O75674 476 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ANGPTL8Q6UXH0 198 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 TRIM67Q6ZTA4 783 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 SNX19Q92543 992 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ARP10275 920 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 PRAMEP78395 509 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 ROR1Q01973 937 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CPA5Q8WXQ8 436 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 DDX56Q9NY93 547 aaKnown RBP11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 CLCA2Q9UQC9 943 aa11.34□□□□□ -0.59
SYNPO2-201ENST00000307142 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.59
SYNPO2-201ENST00000307142 ARHGAP42A6NI28 874 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 HSPA6P17066 643 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 FGFR2P21802 821 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 EPHB3P54753 998 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 VTA1Q9NP79 307 aa11.33□□□□□ -0.6
SYNPO2-201ENST00000307142 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms