RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
SMIM4-201ENST00000307106 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
SMIM4-201ENST00000307106 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 ZFYVE26Q68DK2 2539 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
SMIM4-201ENST00000307106 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
SMIM4-201ENST00000307106 PKD1L2Q7Z442 2459 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 ASAP2O43150 1006 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 KIF4AO95239 1232 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 CHRNB1P11230 501 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 CEBPBP17676 345 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 FCARP24071 287 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 RAB33AQ14088 237 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 CEP68Q76N32 757 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 IRF7Q92985 503 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 TRMT61BQ9BVS5 477 aaKnown RBP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
SMIM4-201ENST00000307106 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
SMIM4-201ENST00000307106 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
SMIM4-201ENST00000307106 LAMA1P25391 3075 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 AXIN1O15169 862 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 KCNK5O95279 499 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 OR1D2P34982 312 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
SMIM4-201ENST00000307106 RFC5P40937 340 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 TUSC3Q13454 348 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 CCDC6Q16204 474 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 Q4G0T1 1027 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
SMIM4-201ENST00000307106 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
SMIM4-201ENST00000307106 NAP1L2Q9ULW6 460 aaPredicted RBP13.16□□□□□ -0.3
SMIM4-201ENST00000307106 CITO14578 2027 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 IGF2RP11717 2491 aa13.16□□□□□ -0.3
SMIM4-201ENST00000307106 CASTOR2A6NHX0 329 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 K7ESF4 209 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 DKC1O60832 514 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 TDP2O95551 362 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 ZNF806P0C7X5 589 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 CCNE1P24864 410 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 GDI1P31150 447 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 QARSP47897 775 aaKnown RBP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 PTENP60484 403 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 EMC2Q15006 297 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 PSAPL1Q6NUJ1 521 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 LSM14BQ9BX40 385 aaKnown RBP13.15□□□□□ -0.3
SMIM4-201ENST00000307106 PARP2Q9UGN5 583 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
SMIM4-201ENST00000307106 ANKRD11Q6UB99 2663 aaPredicted RBP13.15□□□□□ -0.31
SMIM4-201ENST00000307106 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 EML1O00423 815 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
SMIM4-201ENST00000307106 NPTXRO95502 500 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 PTPN2P17706 415 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 PSMC3P17980 439 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 RCAN1P53805 252 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
SMIM4-201ENST00000307106 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 PTGDRQ13258 359 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 LRRC32Q14392 662 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 VITQ6UXI7 678 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 CDR2LQ86X02 465 aaPredicted RBP13.14□□□□□ -0.31
SMIM4-201ENST00000307106 ETNPPLQ8TBG4 499 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 MTRQ99707 1265 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 CDY1Q9Y6F8 540 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 MYO16Q9Y6X6 1858 aa13.14□□□□□ -0.31
SMIM4-201ENST00000307106 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 B4GALT5O43286 388 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms