RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ZMYM3Q14202 1370 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 HSPA9P38646 679 aaKnown RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 PAPOLAP51003 745 aaKnown RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 SAPCD2Q86UD0 394 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 UXS1Q8NBZ7 420 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 CAAP1Q9H8G2 361 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 PIH1D1Q9NWS0 290 aaKnown RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 KPNA2P52292 529 aaKnown RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
USP38-201ENST00000307017 CCDC103Q8IW40 242 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 EFHBQ8N7U6 833 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 TSSK1BQ9BXA7 367 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 LAD1O00515 517 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 PODXLO00592 558 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ATP8B1O43520 1251 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ASNSD1Q9NWL6 643 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 KPNA7A9QM74 516 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 ENDOD1O94919 500 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 CTSHP09668 335 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 GRIN1Q05586 938 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 DDI2Q5TDH0 399 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 MROH9Q5TGP6 573 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 BBS2Q9BXC9 721 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 TASP1Q9H6P5 420 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 OLFML3Q9NRN5 406 aa13.33□□□□□ -0.28
USP38-201ENST00000307017 KRT75O95678 551 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 USP14P54578 494 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 EME1Q96AY2 570 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 MAGED4Q96JG8 741 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 GCNAQ96QF7 691 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 CACNA2D2Q9NY47 1150 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 MEI4A8MW99 385 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 H0YCG3 227 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 ALDH6A1Q02252 535 aaKnown RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 NECTIN1Q15223 517 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 TCEA2Q15560 299 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 NMD3Q96D46 503 aaKnown RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 EPB42P16452 691 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 RARS2Q5T160 578 aaKnown RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 CXorf56Q9H5V9 222 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 STOML1Q9UBI4 398 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 PLEKP08567 350 aaPredicted RBP13.32□□□□□ -0.28
USP38-201ENST00000307017 RRM2BQ7LG56 351 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 A8MXQ7 604 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 RGS5O15539 181 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 PRELPP51888 382 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
USP38-201ENST00000307017 APOL1O14791 398 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 SPATA4Q8NEY3 305 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 CCT8L2Q96SF2 557 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ZHX2Q9Y6X8 837 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 RAD51CO43502 376 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 LZTS3O60299 673 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 MDH1P40925 334 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 PARP8Q8N3A8 854 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 LXNQ9BS40 222 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 HAO1Q9UJM8 370 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 KRT4P19013 534 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 UNC13DQ70J99 1090 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ZNF555Q8NEP9 628 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 KRT72Q14CN4 511 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 EPN3Q9H201 632 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 SARM1Q6SZW1 724 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ARMCX2Q7L311 632 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ATP6V0A4Q9HBG4 840 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ATP10BO94823 1461 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 ANGPT2O15123 496 aa13.31□□□□□ -0.28
USP38-201ENST00000307017 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
USP38-201ENST00000307017 MT-CO1P00395 513 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms