RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ELAC1Q9H777 363 aaKnown RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 PDE11AQ9HCR9 933 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 RNF19AQ9NV58 838 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 TTC26A0AVF1 554 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 FGFR1P11362 822 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 MLH1P40692 756 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 TMCO2Q7Z6W1 182 aaPredicted RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 CREBRFQ8IUR6 639 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 CCDC127Q96BQ5 260 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 RSAD1Q9HA92 442 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 TOPORSQ9NS56 1045 aaPredicted RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 ARMCX3Q9UH62 379 aaPredicted RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 KCNJ18B7U540 433 aa29.47■■■□□ 2.31
HDAC3-201ENST00000305264 GNA14O95837 355 aa29.47■■■□□ 2.31
HDAC3-201ENST00000305264 ATP1A3P13637 1013 aa29.47■■■□□ 2.31
HDAC3-201ENST00000305264 KCNJ12Q14500 433 aa29.47■■■□□ 2.31
HDAC3-201ENST00000305264 HSP90AA2PQ14568 343 aaPredicted RBP29.47■■■□□ 2.31
HDAC3-201ENST00000305264 PCDHB7Q9Y5E2 793 aa29.47■■■□□ 2.31
HDAC3-201ENST00000305264 LACTBL1A8MY62 500 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 AFF1P51825 1210 aaKnown RBP29.46■■■□□ 2.31
HDAC3-201ENST00000305264 MARSP56192 900 aaKnown RBP29.46■■■□□ 2.31
HDAC3-201ENST00000305264 PPP2R3AQ06190 1150 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 BFSP1Q12934 665 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 PSMD6Q15008 389 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 CLLU1OSQ5K130 101 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 INTS8Q75QN2 995 aaKnown RBP29.46■■■□□ 2.31
HDAC3-201ENST00000305264 FRMD5Q7Z6J6 570 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 NPAS4Q8IUM7 802 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 FAM114A1Q8IWE2 563 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 HERVK_113Q902F9 699 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 FAM84AQ96KN4 292 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 GAD1Q99259 594 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 LRFN2Q9ULH4 789 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 GIT1Q9Y2X7 761 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 GOLGA6L19H0YKK7 550 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 UPP2O95045 317 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 AMHP03971 560 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 KCNJ6P48051 423 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 DLG4P78352 724 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 POU5F1Q01860 360 aaKnown RBP29.46■■■□□ 2.31
HDAC3-201ENST00000305264 SPAG1Q07617 926 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 ALKAL1Q6UXT8 129 aa29.46■■■□□ 2.31
HDAC3-201ENST00000305264 PTPRJQ12913 1337 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 ARL5CA6NH57 179 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 TCP11X2Q5H9J9 407 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 HELQQ8TDG4 1101 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 PARD3BQ8TEW8 1205 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 POP1Q99575 1024 aaKnown RBP29.45■■■□□ 2.31
HDAC3-201ENST00000305264 METTL14Q9HCE5 456 aaKnown RBP29.45■■■□□ 2.31
HDAC3-201ENST00000305264 CNTN3Q9P232 1028 aa29.45■■■□□ 2.31
HDAC3-201ENST00000305264 MAGEC2Q9UBF1 373 aaPredicted RBP29.45■■■□□ 2.31
HDAC3-201ENST00000305264 COL4A6Q14031 1691 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 TRIM49P0CI25 452 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 TRIM49CP0CI26 452 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 DLATP10515 647 aaKnown RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 KRT13P13646 458 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 GATMP50440 423 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 VAMP7P51809 220 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 GLRA4Q5JXX5 417 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 C9orf50Q5SZB4 431 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 LMBRD2Q68DH5 695 aaPredicted RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 TRIM59Q8IWR1 403 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 GSTCDQ8NEC7 633 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 ZMAT2Q96NC0 199 aaKnown RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 PLEKHA5Q9HAU0 1116 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 FNDC1Q4ZHG4 1894 aaPredicted RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 LRRIQ3A6PVS8 624 aaPredicted RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 IL18RAPO95256 599 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 XKR4Q5GH76 650 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 DCAF17Q5H9S7 520 aaPredicted RBP29.44■■■□□ 2.3
HDAC3-201ENST00000305264 C1orf220Q5T0J3 134 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 EFCAB13Q8IY85 973 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 TOP1MTQ969P6 601 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 UBN1Q9NPG3 1134 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 PLAGL2Q9UPG8 496 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 INPP5FQ9Y2H2 1132 aa29.44■■■□□ 2.3
HDAC3-201ENST00000305264 PTGESO14684 152 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 NFICP08651 508 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 EEF1GP26641 437 aaKnown RBP29.43■■■□□ 2.3
HDAC3-201ENST00000305264 JADE1Q6IE81 842 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 TDRD15B5MCY1 1934 aaKnown RBP29.43■■■□□ 2.3
HDAC3-201ENST00000305264 OFD1O75665 1012 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 MTIF2P46199 727 aaKnown RBP29.43■■■□□ 2.3
HDAC3-201ENST00000305264 FAM117BQ6P1L5 589 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 TMC2Q8TDI7 906 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 SLC35C1Q96A29 364 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 FNBP1Q96RU3 617 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 GDF15Q99988 308 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 ASB7Q9H672 318 aa29.43■■■□□ 2.3
HDAC3-201ENST00000305264 SCNN1GP51170 649 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 TCERG1LQ5VWI1 586 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 GLB1LQ6UWU2 654 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 RPS6KC1Q96S38 1066 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 CGRRF1Q99675 332 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 MIOSQ9NXC5 875 aa29.42■■■□□ 2.3
HDAC3-201ENST00000305264 TPM4P67936 248 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 KRT31Q15323 416 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 RASIP1Q5U651 963 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 CD302Q8IX05 232 aa29.41■■■□□ 2.3
HDAC3-201ENST00000305264 SMIM28A0A1B0GU29 152 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms