RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZNF568Q3ZCX4 644 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 DAW1Q8N136 415 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 SPIRE2Q8WWL2 714 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 ACO2Q99798 780 aaKnown RBP18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 PAAF1Q9BRP4 392 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 WDR6Q9NNW5 1121 aaKnown RBP18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 SLC38A7Q9NVC3 462 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 LIMD1Q9UGP4 676 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 KMT2EQ8IZD2 1858 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 TRIP11Q15643 1979 aa18.3■□□□□ 0.52
TRAPPC1-201ENST00000303731 CITO14578 2027 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 H0YCG3 227 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 TRAPPC3O43617 180 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 BRD1O95696 1058 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 MCF2P10911 925 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 SCP2P22307 547 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 PTPN5P54829 565 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 STRN3Q13033 797 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 RTP2Q5QGT7 225 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 FAM171A1Q5VUB5 890 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 LILRA6Q6PI73 481 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 PALB2Q86YC2 1186 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 SYT2Q8N9I0 419 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 SMG7Q92540 1137 aaKnown RBP18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 B3GALT6Q96L58 329 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 IRF2BPLQ9H1B7 796 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 POLD4Q9HCU8 107 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 IGSF9Q9P2J2 1179 aa18.29■□□□□ 0.52
TRAPPC1-201ENST00000303731 CLUHO75153 1309 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 PLS3P13797 630 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 NHLH1Q02575 133 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 MAPK7Q13164 816 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 ZRSR1Q15695 479 aaKnown RBP18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 PSMD5Q16401 504 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 MPZL3Q6UWV2 235 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 KCNK18Q7Z418 384 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 HASPINQ8TF76 798 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 DDX27Q96GQ7 796 aaKnown RBP18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 PRKD2Q9BZL6 878 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 CDT1Q9H211 546 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 PIDD1Q9HB75 910 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 USP20Q9Y2K6 914 aa18.28■□□□□ 0.52
TRAPPC1-201ENST00000303731 B3GAT3O94766 335 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 ASGR2P07307 311 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 PROZP22891 400 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 TDGQ13569 410 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 XKR4Q5GH76 650 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 LIN9Q5TKA1 542 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 RTL10Q7L3V2 364 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 CEP57Q86XR8 500 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 LNX1Q8TBB1 728 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 NXPE3Q969Y0 559 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 CALML4Q96GE6 196 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 PNMA5Q96PV4 448 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 LARSQ9P2J5 1176 aaKnown RBP18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 CACNG4Q9UBN1 327 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 FBXW11Q9UKB1 542 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 CACNA1HO95180 2353 aa18.27■□□□□ 0.52
TRAPPC1-201ENST00000303731 VWA8A3KMH1 1905 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 SMIM28A0A1B0GU29 152 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 SLC16A4O15374 487 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 TOM1L1O75674 476 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 RFPL2O75678 378 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ZMYND10O75800 440 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 HNRNPA1P09651 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 PLA2G4BP0C869 781 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 PDCP20941 246 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 AVPR2P30518 371 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 HOXA9P31269 272 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 UBA7P41226 1012 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 SLC12A3P55017 1021 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 UPP1Q16831 310 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 PRSS55Q6UWB4 352 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ALKAL1Q6UXT8 129 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ZPBP2Q6X784 338 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 TAS1R3Q7RTX0 852 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 GLYCTKQ8IVS8 523 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 KCNN1Q92952 543 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ZNF707Q96C28 371 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ACAP3Q96P50 834 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 CLSTN3Q9BQT9 956 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 TARS2Q9BW92 718 aaKnown RBP18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 KCNK12Q9HB15 430 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 EPS15L1Q9UBC2 864 aa18.26■□□□□ 0.51
TRAPPC1-201ENST00000303731 ODF2LQ9ULJ1 636 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms