RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 VMP1Q96GC9 406 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 VPS50Q96JG6 964 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 HSPBP1Q9NZL4 362 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 APOL1O14791 398 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 RPS6P62753 249 aaKnown RBP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 IZUMO3Q5VZ72 239 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 GREM2Q9H772 168 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 SRPRBQ9Y5M8 271 aaKnown RBP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF189O75820 626 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 CDC27P30260 824 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 BFSP2Q13515 415 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 MTMR1Q13613 665 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 LAMC2Q13753 1193 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 NCAPHQ15003 741 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 C10orf88Q9H8K7 445 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLIP1-201ENST00000302528 DLGAP3O95886 979 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 CDH6P55285 790 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 CDK17Q00537 523 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 CCDC81Q6ZN84 652 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 GAS2L3Q86XJ1 694 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 RHOT1Q8IXI2 618 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 LINC00301Q8NCQ3 95 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 CAPN10Q9HC96 672 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 TRPC7Q9HCX4 862 aa10.93□□□□□ -0.66
CLIP1-201ENST00000302528 RAD17O75943 681 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 MLH1P40692 756 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 EIF2B5Q13144 721 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PKP1Q13835 747 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 RCSD1Q6JBY9 416 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 FBXO38Q6PIJ6 1188 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PCYOX1LQ8NBM8 494 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 NSUN7Q8NE18 718 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PLEKHA5Q9HAU0 1116 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PARVBQ9HBI1 364 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 NR3C1P04150 777 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 MYBL1P10243 752 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 KCNA6P17658 529 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 IL13P35225 146 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 NCKAP1LP55160 1127 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SESN2P58004 480 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 C16orf89Q6UX73 402 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 GSPT2Q8IYD1 628 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ADAM21Q9UKJ8 722 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PLXNC1O60486 1568 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 NDUFS3O75489 264 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ADORA1P30542 326 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 C11orf96Q7Z7L8 435 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PRUNE1Q86TP1 453 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 RHPN2Q8IUC4 686 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SSH3Q8TE77 659 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 BRD8Q9H0E9 1235 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 C20orf96Q9NUD7 363 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SLC30A1Q9Y6M5 507 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 TK2O00142 265 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 GFPT1Q06210 699 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ARHGEF7Q14155 803 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ELMO2Q96JJ3 720 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PLEKHF1Q96S99 279 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 MAP3K20Q9NYL2 800 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 CD274Q9NZQ7 290 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 LSM7Q9UK45 103 aaKnown RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 C3orf70A6NLC5 250 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SLC16A4O15374 487 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 RGS5O15539 181 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 KLHL18O94889 574 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 LCP1P13796 627 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PSMD7P51665 324 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ATXN3P54252 364 aaPredicted RBP10.92□□□□□ -0.66
CLIP1-201ENST00000302528 TPI1P60174 286 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 OOSP2Q86WS3 158 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 GALNT4Q8N4A0 578 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SHCBP1Q8NEM2 672 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 KCNK16Q96T55 309 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 SYBUQ9NX95 663 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 ARHGEF38Q9NXL2 777 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 PCDHB6Q9Y5E3 794 aa10.92□□□□□ -0.66
CLIP1-201ENST00000302528 AP3B1O00203 1094 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 CSE1LP55060 971 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ALDH6A1Q02252 535 aaKnown RBP10.91□□□□□ -0.66
CLIP1-201ENST00000302528 PHKG1Q16816 387 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 DNAL1Q4LDG9 190 aa10.91□□□□□ -0.66
CLIP1-201ENST00000302528 ZMYM1Q5SVZ6 1142 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms