RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 ATP2A3Q93084 1043 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 MCM8Q9UJA3 840 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 COPEO14579 308 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 EPHB2P29323 1055 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 KRT81Q14533 505 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 CCPG1Q9ULG6 757 aa12.89□□□□□ -0.35
PDGFD-201ENST00000302251 B2RBV5 119 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 RIPK2O43353 540 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SNX3O60493 162 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 LPXNO60711 386 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SGPL1O95470 568 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 KRT16P08779 473 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 RALAP11233 206 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 DDR1Q08345 913 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 THOC5Q13769 683 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 STAT4Q14765 748 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CD302Q8IX05 232 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ST13P4Q8IZP2 240 aaPredicted RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ZSWIM1Q9BR11 485 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 NAALADL1Q9UQQ1 740 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ASAP2O43150 1006 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 LMNAP02545 664 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ALDH18A1P54886 795 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SLC5A5Q92911 643 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CSRNP1Q96S65 589 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 WDR11Q9BZH6 1224 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SPECC1L-ADORA2AF8WAN1 911 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ZBTB39O15060 712 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 GHRP10912 638 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 KRT4P19013 534 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 BPIFB4P59827 614 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CDO1Q16878 200 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MREGQ8N565 214 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 CYP2W1Q8TAV3 490 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 HSPH1Q92598 858 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 LXNQ9BS40 222 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 NDE1Q9NXR1 346 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MRPL11Q9Y3B7 192 aaKnown RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 HGSNATQ68CP4 663 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 LRRC43Q8N309 656 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 KCTD6Q8NC69 237 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 FAM20AQ96MK3 541 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ROPN1BQ9BZX4 212 aaPredicted RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 TTYH3Q9C0H2 523 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 ROPN1Q9HAT0 212 aaPredicted RBP12.88□□□□□ -0.35
PDGFD-201ENST00000302251 COX16Q9P0S2 106 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 HEY2Q9UBP5 337 aa12.88□□□□□ -0.35
PDGFD-201ENST00000302251 FLT1P17948 1338 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 H3BRJ5 948 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 TJP3O95049 919 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 EYA4O95677 639 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 GSTA1P08263 222 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 KRT10P13645 584 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 GIT2Q14161 759 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 TAF1BQ53T94 588 aaPredicted RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 CENPKQ9BS16 269 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 ZCWPW1Q9H0M4 648 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 CREB3O43889 395 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 ZBED4O75132 1171 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 ENTPD5O75356 428 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 CCNHP51946 323 aaPredicted RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 BZW1Q7L1Q6 419 aaKnown RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 LOC100653049A0A140TA62 436 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 CCDC22O60826 627 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 KRT34O76011 436 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 SLURP2P0DP57 97 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 RARAP10276 462 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
PDGFD-201ENST00000302251 ARL4CP56559 192 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 DEUP1Q05D60 604 aa12.87□□□□□ -0.35
PDGFD-201ENST00000302251 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms