RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 FOXN3O00409 490 aaPredicted RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 DDX3XO00571 662 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM3-202ENST00000302206 DLATP10515 647 aaKnown RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM3-202ENST00000302206 CLCN3P51790 818 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 CDC42EP1Q00587 391 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 SP3Q02447 781 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 MBTD1Q05BQ5 628 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 KYAT1Q16773 422 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 ARHGAP44Q17R89 818 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 MPZL3Q6UWV2 235 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 HELQQ8TDG4 1101 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 TAS1R2Q8TE23 839 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 DHX38Q92620 1227 aaKnown RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 POP1Q99575 1024 aaKnown RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 CARD6Q9BX69 1037 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 TOPORSQ9NS56 1045 aaPredicted RBP12.95□□□□□ -0.34
TPM3-202ENST00000302206 ANKFY1Q9P2R3 1169 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 DUSP10Q9Y6W6 482 aa12.95□□□□□ -0.34
TPM3-202ENST00000302206 F2P00734 622 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 TNNI1P19237 187 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 TNFAIP3P21580 790 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 ACOT2P49753 483 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 PRPF4BQ13523 1007 aaKnown RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 GRIK4Q16099 956 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 WDR44Q5JSH3 913 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 ATF7IP2Q5U623 682 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 CALR3Q96L12 384 aaKnown RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 NLRP4Q96MN2 994 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 PDE11AQ9HCR9 933 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
TPM3-202ENST00000302206 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 SAR1BQ9Y6B6 198 aa12.94□□□□□ -0.34
TPM3-202ENST00000302206 INO80B-WBP1J3KQ70 363 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 TNPO2O14787 897 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 DYNC1LI2O43237 492 aaPredicted RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 ZEB2O60315 1214 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 MOCS3O95396 460 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 TMEM253P0C7T8 217 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 CPT1AP50416 773 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 IGBP1P78318 339 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 TCEAL1Q15170 157 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 MARCH8Q5T0T0 291 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 TDRD10Q5VZ19 366 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 UBXN4Q92575 508 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 INO80BQ9C086 356 aaPredicted RBP12.93□□□□□ -0.34
TPM3-202ENST00000302206 C1orf112Q9NSG2 853 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 PCDHGC5Q9Y5F6 944 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
TPM3-202ENST00000302206 NCANO14594 1321 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 NRCAMQ92823 1304 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 HAS3O00219 553 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 ADCY6O43306 1168 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 KPNA6O60684 536 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 LRRN2O75325 713 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 IL18RAPO95256 599 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 PNMA6AP0CW24 399 aaPredicted RBP12.92□□□□□ -0.34
TPM3-202ENST00000302206 MCF2P10911 925 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 TCP1P17987 556 aaKnown RBP12.92□□□□□ -0.34
TPM3-202ENST00000302206 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 WNT7BP56706 349 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 BPIFB4P59827 614 aa12.92□□□□□ -0.34
TPM3-202ENST00000302206 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
TPM3-202ENST00000302206 PCBP1Q15365 356 aaKnown RBP eCLIP12.92□□□□□ -0.342e-16■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms