RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 TDRD3Q9H7E2 651 aaKnown RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SYTL2Q9HCH5 934 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 STXBP3O00186 592 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 HOXB7P09629 217 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 PDHBP11177 359 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 AKIRIN2Q53H80 203 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 C17orf80Q9BSJ5 609 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 PI4K2AQ9BTU6 479 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 WASHC5Q12768 1159 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 SENP1Q9P0U3 644 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 OSBPP22059 807 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 RMDN3Q96TC7 470 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 TRPC7Q9HCX4 862 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 XPO7Q9UIA9 1087 aaKnown RBP13.03□□□□□ -0.32
ABCA3-201ENST00000301732 HAO1Q9UJM8 370 aa13.03□□□□□ -0.32
ABCA3-201ENST00000301732 H0Y626 953 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 RAD51CO43502 376 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 TLR2O60603 784 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 PPP1R37O75864 691 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 TRIM16O95361 564 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 HNRNPH1P31943 449 aaKnown RBP13.02□□□□□ -0.32
ABCA3-201ENST00000301732 SERPINB5P36952 375 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 DCAF15Q66K64 600 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 SARM1Q6SZW1 724 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 SH3GL2Q99962 352 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 MT-CO1P00395 513 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 SDC4P31431 198 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 TBC1D9BQ66K14 1250 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 ZNF786Q8N393 782 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 EFHBQ8N7U6 833 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 OR9Q1Q8NGQ5 310 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.32
ABCA3-201ENST00000301732 APOL5Q9BWW9 433 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 RAB6BQ9NRW1 208 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 ZFATQ9P243 1243 aa13.02□□□□□ -0.32
ABCA3-201ENST00000301732 KLC1Q07866 573 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 KYNUQ16719 465 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
ABCA3-201ENST00000301732 ASMTLO95671 621 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
ABCA3-201ENST00000301732 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 FAM162AQ96A26 154 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 MCEEQ96PE7 176 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 KCNB2Q92953 911 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 MTERF3Q96E29 417 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
ABCA3-201ENST00000301732 A8MXQ7 604 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 NFKBIAP25963 317 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 SOAT1P35610 550 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 CEP95Q96GE4 821 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 OLFM3Q96PB7 478 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 EPB42P16452 691 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 CYP4A22Q5TCH4 519 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 ZNF555Q8NEP9 628 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 NDEL1Q9GZM8 345 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 XDHP47989 1333 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 MAPK11Q15759 364 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 SUSD4Q5VX71 490 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 SAPCD2Q86UD0 394 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 POLR3FQ9H1D9 316 aaPredicted RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 NFKBIL1Q9UBC1 381 aaPredicted RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 CYTH3O43739 400 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 SERPINB2P05120 415 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 LSP1P33241 339 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 ALFQ53S48 1182 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
ABCA3-201ENST00000301732 TMEM47Q9BQJ4 181 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 PKD2L2Q9NZM6 624 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 GTF2A1LQ9UNN4 478 aa13.01□□□□□ -0.33
ABCA3-201ENST00000301732 UTYO14607 1347 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms