RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 SOCS4Q8WXH5 440 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 SMARCE1Q969G3 411 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 DHX58Q96C10 678 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 DTNBP1Q96EV8 351 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 HNRNPABQ99729 332 aaKnown RBP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 SNTG2Q9NY99 539 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 RRN3Q9NYV6 651 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 PI4KBQ9UBF8 816 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 MORF4L1Q9UBU8 362 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 GRID1Q9ULK0 1009 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 MRPL11Q9Y3B7 192 aaKnown RBP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 AOX1Q06278 1338 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 CHURC1-FNTBB4DL54 471 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 CETN3O15182 167 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 YKT6O15498 198 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 SLC7A4O43246 635 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 STRNO43815 780 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 DNTTP04053 509 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 P4HBP07237 508 aaKnown RBP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 CNGA1P29973 690 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 PLCD1P51178 756 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 SLC8A3P57103 927 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 CUL3Q13618 768 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 RFTN1Q14699 578 aaPredicted RBP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 NEPROQ6NW34 567 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 C1orf228Q6PIY5 440 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 IGF2-ASQ6U949 168 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 NRSN1Q8IZ57 195 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 LSMEM2Q8N112 164 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 ZNF619Q8N2I2 560 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 OR52K2Q8NGK3 314 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 XAGE2Q96GT9 111 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 C19orf43Q9BQ61 176 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 TNKS2Q9H2K2 1166 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 ELAC1Q9H777 363 aaKnown RBP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 SCPEP1Q9HB40 452 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 ABCB6Q9NP58 842 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.97□□□□□ -1.61
ZNF560-201ENST00000301480 MTRRQ9UBK8 725 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 HPCAL4Q9UM19 191 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 DDX19BQ9UMR2 479 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 DUSP12Q9UNI6 340 aa4.97□□□□□ -1.61
ZNF560-201ENST00000301480 LOC105371267A0A1B0GV96 52 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 FAM221AA4D161 298 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 USP17L5A8MUK1 530 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 H0Y626 953 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RNF113AO15541 343 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SRGAP3O43295 1099 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 GLRX3O76003 335 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 OR5F1O95221 314 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ATP5BP06576 529 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RHOXF2BP0C7M4 288 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RPS2P15880 293 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PRDX5P30044 214 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 BMP8BP34820 402 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PPP1R2P41236 205 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 BTDP43251 543 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PHKA1P46020 1223 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 VPS41P49754 854 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SULT1E1P49888 294 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 KPNA1P52294 538 aaPredicted RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 AP3M2P53677 418 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 NFE2L1Q14494 772 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 DSC3Q14574 896 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 GRIK5Q16478 980 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 WLSQ5T9L3 541 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PPP1R2P3Q6NXS1 205 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 CAND1Q86VP6 1230 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SPARTQ8N0X7 666 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ZKSCAN4Q969J2 545 aaPredicted RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RHOXF2Q9BQY4 288 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 LLPHQ9BRT6 129 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ASPSCR1Q9BZE9 553 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 EHD4Q9H223 541 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 LIN28AQ9H9Z2 209 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ATP13A1Q9HD20 1204 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RYDENQ9NUL5 291 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 EPS15L1Q9UBC2 864 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SCAF8Q9UPN6 1271 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PCDHGB5Q9Y5G0 923 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ZHX2Q9Y6X8 837 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 A8MVJ9 347 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 H3BRB1 525 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 KRIT1O00522 736 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 CDK2AP1O14519 115 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 NVLO15381 856 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 ACTN4O43707 911 aaKnown RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 GREM1O60565 184 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SOCS5O75159 536 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 SGPL1O95470 568 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 CYP2E1P05181 493 aaPredicted RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 HLA-DOAP06340 250 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 XPAP23025 273 aaPredicted RBP4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PMLP29590 882 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 MAPK4P31152 587 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 PRKAR1BP31321 381 aa4.96□□□□□ -1.62
ZNF560-201ENST00000301480 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms