RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MARCKSL1P49006 195 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 MFAP3P55082 362 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 SKOR1P84550 965 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 C9orf131Q5VYM1 1079 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 ALS2CLQ60I27 953 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 EMBQ6PCB8 327 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 COPS5Q92905 334 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 HES6Q96HZ4 224 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 NT5C1BQ96P26 610 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 AMACRQ9UHK6 382 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 MYPNQ86TC9 1320 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 ZNF233A6NK53 670 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 CNMDO75829 334 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 FGGP02679 453 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
TPM4-201ENST00000300933 STAT5BP51692 787 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 STRN3Q13033 797 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 MESDQ14696 234 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 ALG3Q92685 438 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 CABS1Q96KC9 395 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 CELF4Q9BZC1 486 aaKnown RBP23.55■■□□□ 1.36
TPM4-201ENST00000300933 PORCNQ9H237 461 aa23.55■■□□□ 1.36
TPM4-201ENST00000300933 SUCLA2Q9P2R7 463 aaPredicted RBP23.55■■□□□ 1.36
TPM4-201ENST00000300933 PTPRFP10586 1907 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 MAPK13O15264 365 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 MEFVO15553 781 aaPredicted RBP23.54■■□□□ 1.36
TPM4-201ENST00000300933 ATG7O95352 703 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 GJB1P08034 283 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 CYP11B1P15538 503 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 SEC24CP53992 1094 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 FMO1Q01740 532 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 LRRC71Q8N4P6 559 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 SHC3Q92529 594 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 PBKQ96KB5 322 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 DHX33Q9H6R0 707 aaKnown RBP23.54■■□□□ 1.36
TPM4-201ENST00000300933 AGO2Q9UKV8 859 aaKnown RBP23.54■■□□□ 1.36
TPM4-201ENST00000300933 ALG6Q9Y672 507 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 WDR90Q96KV7 1748 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 PGRMC1O00264 195 aaKnown RBP23.54■■□□□ 1.36
TPM4-201ENST00000300933 ICAM3P32942 547 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 SNRPFP62306 86 aaKnown RBP23.54■■□□□ 1.36
TPM4-201ENST00000300933 BIRC3Q13489 604 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 TRAPPC12Q8WVT3 735 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 KRT35Q92764 455 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 GLG1Q92896 1179 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 CDCA5Q96FF9 252 aa23.54■■□□□ 1.36
TPM4-201ENST00000300933 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.54■■□□□ 1.362e-12■■□□□ 12.2
TPM4-201ENST00000300933 NCANO14594 1321 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 ARID2Q68CP9 1835 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 SART1O43290 800 aaKnown RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 SRGAP2CP0DJJ0 459 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 IBSPP21815 317 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 RFX1P22670 979 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 LSP1P33241 339 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 FNTAP49354 379 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 LLGL2Q6P1M3 1020 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 ZBTB33Q86T24 672 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 FBXO16Q8IX29 292 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 SYCE1Q8N0S2 351 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.362e-8■■■■□ 22.9
TPM4-201ENST00000300933 CD248Q9HCU0 757 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 TMEM59LQ9UK28 342 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 SBF1O95248 1867 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 DNAH12Q6ZR08 3092 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 A0A0G2JLL6 359 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 ECM2O94769 699 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 GPC3P51654 580 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 MKRN3Q13064 507 aaKnown RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 CRELD2Q6UXH1 353 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 PRRT2Q7Z6L0 340 aaPredicted RBP23.53■■□□□ 1.36
TPM4-201ENST00000300933 IFT20Q8IY31 132 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 SCFD2Q8WU76 684 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 HVCN1Q96D96 273 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 FNBP1Q96RU3 617 aa23.53■■□□□ 1.36
TPM4-201ENST00000300933 DDX3YO15523 660 aaKnown RBP23.52■■□□□ 1.36
TPM4-201ENST00000300933 CFAP58Q5T655 872 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 ACTRT1Q8TDG2 376 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 COQ4Q9Y3A0 265 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 ERVK-9P63128 1117 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 CDR2LQ86X02 465 aaPredicted RBP23.52■■□□□ 1.36
TPM4-201ENST00000300933 PRPF31Q8WWY3 499 aaKnown RBP23.52■■□□□ 1.36
TPM4-201ENST00000300933 OPTNQ96CV9 577 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 TRIM31Q9BZY9 425 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 ISCUQ9H1K1 167 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
TPM4-201ENST00000300933 GARTP22102 1010 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 TNNC1P63316 161 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 CAPSQ13938 189 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 GJC2Q5T442 439 aaPredicted RBP23.51■■□□□ 1.35
TPM4-201ENST00000300933 TDRD10Q5VZ19 366 aaKnown RBP23.51■■□□□ 1.35
TPM4-201ENST00000300933 TMC2Q8TDI7 906 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 FAM212AQ96EL1 285 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 GDF3Q9NR23 364 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 PDGFCQ9NRA1 345 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 MCM3APO60318 1980 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 CYP2C8P10632 490 aa23.51■■□□□ 1.35
TPM4-201ENST00000300933 ARL2P36404 184 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms