RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.22■□□□□ 0.996e-6■■■■■ 48.1
NFIL3-201ENST00000297689 FAM169AQ9Y6X4 670 aa21.22■□□□□ 0.99
NFIL3-201ENST00000297689 NDUFAB1O14561 156 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 DKC1O60832 514 aaKnown RBP eCLIP21.21■□□□□ 0.99
NFIL3-201ENST00000297689 ZC3H11AO75152 810 aaKnown RBP eCLIP21.21■□□□□ 0.995e-6■■□□□ 12.3
NFIL3-201ENST00000297689 TMEM132BQ14DG7 1078 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 SKIDA1Q1XH10 827 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 SNRNP48Q6IEG0 339 aaKnown RBP21.21■□□□□ 0.99
NFIL3-201ENST00000297689 ACAD10Q6JQN1 1059 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 ABHD15Q6UXT9 468 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 CATSPERGQ6ZRH7 1159 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 GPD1LQ8N335 351 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 MCPH1Q8NEM0 835 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 TCEAL9Q9UHQ7 104 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 AFG3L2Q9Y4W6 797 aa21.21■□□□□ 0.99
NFIL3-201ENST00000297689 ATXN2Q99700 1313 aaKnown RBP21.21■□□□□ 0.99
NFIL3-201ENST00000297689 ATP2A1O14983 1001 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 USP2O75604 605 aaPredicted RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 EIF3BP55884 814 aaKnown RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 PRKG1Q13976 671 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 ENOSF1Q7L5Y1 443 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 SLC13A5Q86YT5 568 aaPredicted RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 C12orf50Q8NA57 414 aaPredicted RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.2■□□□□ 0.993e-6■■□□□ 14.4
NFIL3-201ENST00000297689 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 PSPC1Q8WXF1 523 aaKnown RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 POMGNT1Q8WZA1 660 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 ZNF516Q92618 1163 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 DHX38Q92620 1227 aaKnown RBP21.2■□□□□ 0.99
NFIL3-201ENST00000297689 TLCD1Q96CP7 247 aa21.2■□□□□ 0.99
NFIL3-201ENST00000297689 TCRBV7S2A1N4TA0A589 114 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 PODXLO00592 558 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 PDE6CP51160 858 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 CLEC16AQ2KHT3 1053 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 SWSAP1Q6NVH7 229 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 USP37Q86T82 979 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 CCDC60Q8IWA6 550 aaPredicted RBP21.2■□□□□ 0.98
NFIL3-201ENST00000297689 FBXO25Q8TCJ0 367 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 MAGOHBQ96A72 148 aaKnown RBP21.2■□□□□ 0.98
NFIL3-201ENST00000297689 BTBD6Q96KE9 485 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 SNX24Q9Y343 169 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 STYXL1Q9Y6J8 313 aa21.2■□□□□ 0.98
NFIL3-201ENST00000297689 TMEM110-MUSTN1A8MSY1 372 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 PSAPP07602 524 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 UNGP13051 313 aaPredicted RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 RPL21P46778 160 aaKnown RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 ZNF653Q96CK0 615 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 PABPC3Q9H361 631 aaKnown RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 CYP26B1Q9NR63 512 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 CNOT8Q9UFF9 292 aaKnown RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 RASAL2Q9UJF2 1139 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 ATP8A1Q9Y2Q0 1164 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 DOCK5Q9H7D0 1870 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 A0A087WUV0 522 aaPredicted RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
NFIL3-201ENST00000297689 PAEPP09466 180 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 SEL1L2Q5TEA6 688 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 B4GALNT4Q76KP1 1039 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 MYCBPAPQ8TBZ2 947 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 CCT8L2Q96SF2 557 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 MAF1Q9H063 256 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 PAPPA2Q9BXP8 1791 aa21.19■□□□□ 0.98
NFIL3-201ENST00000297689 SPATA31C2B4DYI2 1134 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 CPP00450 1065 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 RARAP10276 462 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 GBP1P32455 592 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 SEC24CP53992 1094 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 CCDC137Q6PK04 289 aaKnown RBP21.18■□□□□ 0.98
NFIL3-201ENST00000297689 NLRP14Q86W24 1093 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 RNF25Q96BH1 459 aaPredicted RBP21.18■□□□□ 0.98
NFIL3-201ENST00000297689 JPH1Q9HDC5 661 aaPredicted RBP21.18■□□□□ 0.98
NFIL3-201ENST00000297689 CYP39A1Q9NYL5 469 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 SLC9A2Q9UBY0 812 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 LCTP09848 1927 aa21.18■□□□□ 0.98
NFIL3-201ENST00000297689 DCDC2CA8MYV0 355 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 FSCN2O14926 492 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 STAM2O75886 525 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 FAM107AO95990 144 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 HPDP32754 393 aaPredicted RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 COILP38432 576 aaPredicted RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 PLTPP55058 493 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 ACTR2P61160 394 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 PPP2R2AP63151 447 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 PRKCEQ02156 737 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 SUPT20HL1Q3ZLR7 823 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 SPATS2Q86XZ4 545 aaKnown RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 ZNF473Q8WTR7 871 aaKnown RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 ELMO3Q96BJ8 720 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 CDHR1Q96JP9 859 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 FAM81BQ96LP2 452 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 LRRC19Q9H756 370 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 GGA2Q9UJY4 613 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 NOVA2Q9UNW9 492 aaKnown RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 SNCAIPQ9Y6H5 919 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 MYPNQ86TC9 1320 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 LOC285556D6RIA3 1793 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 SPDYE16A6NNV3 312 aaPredicted RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 HNRNPDLO14979 420 aaKnown RBP21.17■□□□□ 0.98
NFIL3-201ENST00000297689 FNTAP49354 379 aa21.17■□□□□ 0.98
NFIL3-201ENST00000297689 PMS2P54278 862 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms