RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.311e-6■□□□□ 10.1
ARHGEF28-201ENST00000296794 DRC3Q9H069 523 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 UVRAGQ9P2Y5 699 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC1A1P43005 524 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 PTGISQ16647 500 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 LMBRD2Q68DH5 695 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 TTC1Q99614 292 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 VPS11Q9H270 941 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 PARVAQ9NVD7 372 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 FAM107AO95990 144 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 NDUFB10O96000 172 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 EPHB1P54762 984 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 TSPY1Q01534 308 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 OSBPL1AQ9BXW6 950 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 TAF1BQ53T94 588 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 SYDE1Q6ZW31 735 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 ATP6V1E2Q96A05 226 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 HAUS8Q9BT25 410 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 ANLNQ9NQW6 1124 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 GPC3P51654 580 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 FSCBQ5H9T9 825 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 KLHDC7AQ5VTJ3 777 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 LRRC31Q6UY01 552 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 IL17RAQ96F46 866 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 SENP1Q9P0U3 644 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 M0QYV0 167 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 TBX3O15119 743 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 CDH16O75309 829 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 TMEM253P0C7T8 217 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 IL1RL1Q01638 556 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 AGBL3Q8NEM8 1001 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC13A1Q9BZW2 595 aa16.99■□□□□ 0.31
ARHGEF28-201ENST00000296794 PPFIA2O75334 1257 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 S100BP04271 92 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ITIH2P19823 946 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 HIF1AQ16665 826 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 NUDCD3Q8IVD9 361 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 GTF3C2Q8WUA4 911 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 KLHL11Q9NVR0 708 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 KLHL8Q9P2G9 620 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 CAPN6Q9Y6Q1 641 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ROR1Q01973 937 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 TKFCQ3LXA3 575 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 CDKAL1Q5VV42 579 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 MYLK4Q86YV6 388 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ANKMY2Q8IV38 441 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■■ 76.9
ARHGEF28-201ENST00000296794 C9orf72Q96LT7 481 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ERP44Q9BS26 406 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ALG13Q9NP73 1137 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 FRMPD1Q5SYB0 1578 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 PITPNM2Q9BZ72 1349 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 H3BQF6 201 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ZC2HC1CQ53FD0 456 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 RBM15Q96T37 977 aaKnown RBP eCLIP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 NCAPGQ9BPX3 1015 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 ADAM33Q9BZ11 813 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 SETSIPP0DME0 302 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 NFKBIAP25963 317 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 SDC4P31431 198 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 YWHABP31946 246 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 STAT5BP51692 787 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 SH2D3AQ9BRG2 576 aa16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 MRPL4Q9BYD3 311 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 MTIF3Q9H2K0 278 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
ARHGEF28-201ENST00000296794 GNGT2O14610 69 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 RGS9BPQ6ZS82 235 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 FBXO33Q7Z6M2 555 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 SCN4BQ8IWT1 228 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 ANKRD13AQ8IZ07 590 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 TRIML2Q8N7C3 387 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 LRRN4CLQ8ND94 238 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 UPF3AQ9H1J1 476 aaKnown RBP16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 VCPKMTQ9H867 229 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 SUCLA2Q9P2R7 463 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC4A1P02730 911 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 HSD17B3P37058 310 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 BCAR1P56945 870 aa16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 TSTA3Q13630 321 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 PAPD7Q5XG87 772 aaKnown RBP16.97■□□□□ 0.31
ARHGEF28-201ENST00000296794 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms