RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 BLZF1Q9H2G9 400 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
HMGB2-201ENST00000296503 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 COG5Q9UP83 839 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 PLXNA4Q9HCM2 1894 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 ABLIM1O14639 778 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 PTGESO14684 152 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 CXCL14O95715 111 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 SYKP43405 635 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 MCL1Q07820 350 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 DSC1Q08554 894 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
HMGB2-201ENST00000296503 MAP4K3Q8IVH8 894 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 RBSNQ9H1K0 784 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 TLE6Q9H808 572 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 ZMYM2Q9UBW7 1377 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
HMGB2-201ENST00000296503 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 PER2O15055 1255 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 NCK2O43639 380 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 PIGRP01833 764 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 SLFN14P0C7P3 912 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 CASP1P29466 404 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 NRIP1P48552 1158 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 HYAL1Q12794 435 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 COASYQ13057 564 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 TUSC3Q13454 348 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 GLRA4Q5JXX5 417 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
HMGB2-201ENST00000296503 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
HMGB2-201ENST00000296503 SMIM28A0A1B0GU29 152 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 TADA2AO75478 443 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 CLTAP09496 248 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 MYBP10242 640 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 NDUFA8P51970 172 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
HMGB2-201ENST00000296503 TFF2Q03403 129 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 CUL4BQ13620 913 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 ALCAMQ13740 583 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
HMGB2-201ENST00000296503 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
HMGB2-201ENST00000296503 HPS3Q969F9 1004 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 PAGE5Q96GU1 130 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 UBE2ZQ9H832 354 aaPredicted RBP13.18□□□□□ -0.3
HMGB2-201ENST00000296503 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
HMGB2-201ENST00000296503 HIDE1A8MVS5 230 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 FSCN2O14926 492 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 OGTO15294 1046 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
HMGB2-201ENST00000296503 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
HMGB2-201ENST00000296503 KCNA1Q09470 495 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 KYAT1Q16773 422 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 AAK1Q2M2I8 961 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 UNC13DQ70J99 1090 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 MRPL43Q8N983 215 aaKnown RBP13.17□□□□□ -0.3
HMGB2-201ENST00000296503 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
HMGB2-201ENST00000296503 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 STRA6Q9BX79 667 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 CACNG4Q9UBN1 327 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 STK39Q9UEW8 545 aa13.17□□□□□ -0.3
HMGB2-201ENST00000296503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 A0A0B4J269 797 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TISP43B9A030 160 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 F8W810 466 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 PPP1R37O75864 691 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 KCNA5P22460 613 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 CASP5P51878 434 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 POSTNQ15063 836 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 SLC10A6Q3KNW5 377 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms