RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TTI2Q6NXR4 508 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 CD302Q8IX05 232 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 ZC3H3Q8IXZ2 948 aaKnown RBP24.58■■□□□ 1.53
LINC01116-201ENST00000295549 URGCPQ8TCY9 931 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 TSPAN18Q96SJ8 248 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 PBX4Q9BYU1 374 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 INPP5FQ9Y2H2 1132 aa24.58■■□□□ 1.53
LINC01116-201ENST00000295549 TYRO3Q06418 890 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 BTG3Q14201 252 aaPredicted RBP24.57■■□□□ 1.52
LINC01116-201ENST00000295549 RAB30Q15771 203 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 CBWD2Q8IUF1 395 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 BRSK2Q8IWQ3 736 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 LRRC43Q8N309 656 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 RPS6KC1Q96S38 1066 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 TBC1D13Q9NVG8 400 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 MIOSQ9NXC5 875 aa24.57■■□□□ 1.52
LINC01116-201ENST00000295549 SMIM28A0A1B0GU29 152 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 SYCE3A1L190 88 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 PTGESO14684 152 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 MAPK13O15264 365 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 KCNE1P15382 129 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 SCNN1GP51170 649 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 PPP2R3AQ06190 1150 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 ZSCAN23Q3MJ62 389 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 PAN2Q504Q3 1202 aaKnown RBP24.56■■□□□ 1.52
LINC01116-201ENST00000295549 CXCL16Q9H2A7 254 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 ASB7Q9H672 318 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 RBAKQ9NYW8 714 aaPredicted RBP24.56■■□□□ 1.52
LINC01116-201ENST00000295549 MSRAQ9UJ68 235 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 FRMD4BQ9Y2L6 1034 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 COL4A6Q14031 1691 aa24.56■■□□□ 1.52
LINC01116-201ENST00000295549 TRIOBPQ9H2D6 2365 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 LACTBL1A8MY62 500 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 CETN3O15182 167 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 IL18RAPO95256 599 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 THP07101 528 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 CCDC192P0DO97 292 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 STX17P56962 302 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 GRIK3Q13003 919 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 LRRC55Q6ZSA7 311 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 FIBCD1Q8N539 461 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 RDH13Q8NBN7 331 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 NOC3LQ8WTT2 800 aaKnown RBP24.55■■□□□ 1.52
LINC01116-201ENST00000295549 MFSD14AQ96MC6 490 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 MED15Q96RN5 788 aa24.55■■□□□ 1.52
LINC01116-201ENST00000295549 DUSP9Q99956 384 aaKnown RBP24.55■■□□□ 1.52
LINC01116-201ENST00000295549 LCHNA4D1U4 455 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 POMCP01189 267 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 MYOGP15173 224 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 PBX2P40425 430 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 CASP4P49662 377 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 ZMAT2Q96NC0 199 aaKnown RBP24.54■■□□□ 1.52
LINC01116-201ENST00000295549 PPP1R10Q96QC0 940 aaKnown RBP24.54■■□□□ 1.52
LINC01116-201ENST00000295549 FUCA2Q9BTY2 467 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 MKNK1Q9BUB5 465 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 PLAGL2Q9UPG8 496 aa24.54■■□□□ 1.52
LINC01116-201ENST00000295549 YBX2Q9Y2T7 364 aaKnown RBP24.54■■□□□ 1.52
LINC01116-201ENST00000295549 AKAP3O75969 853 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 PSMC2P35998 433 aaKnown RBP24.53■■□□□ 1.52
LINC01116-201ENST00000295549 RNASELQ05823 741 aaKnown RBP24.53■■□□□ 1.52
LINC01116-201ENST00000295549 CYP24A1Q07973 514 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 NAB2Q15742 525 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 CEP135Q66GS9 1140 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 CLP1Q92989 425 aaKnown RBP24.53■■□□□ 1.52
LINC01116-201ENST00000295549 FAM212AQ96EL1 285 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 CEP63Q96MT8 703 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 DERAQ9Y315 318 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 C2CD2Q9Y426 696 aa24.53■■□□□ 1.52
LINC01116-201ENST00000295549 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.53■■□□□ 1.52
LINC01116-201ENST00000295549 CA3P07451 260 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 DSC1Q08554 894 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 SURF1Q15526 300 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 NT5DC4Q86YG4 428 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 CSGALNACT2Q8N6G5 542 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 EEF2KMTQ96G04 330 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 CWH43Q9H720 699 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 SLC38A7Q9NVC3 462 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 MRPL42Q9Y6G3 142 aaKnown RBP24.52■■□□□ 1.52
LINC01116-201ENST00000295549 LINC01553A4QN01 128 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 SLC16A3O15427 465 aaKnown RBP24.52■■□□□ 1.52
LINC01116-201ENST00000295549 MCCD1P59942 119 aaPredicted RBP24.52■■□□□ 1.52
LINC01116-201ENST00000295549 PSMD6Q15008 389 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 ZBTB6Q15916 424 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 GLRA4Q5JXX5 417 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 FILIP1Q7Z7B0 1213 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 ZNF280BQ86YH2 543 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 PDE11AQ9HCR9 933 aa24.52■■□□□ 1.52
LINC01116-201ENST00000295549 FNDC1Q4ZHG4 1894 aaPredicted RBP24.51■■□□□ 1.51
LINC01116-201ENST00000295549 DDHD2O94830 711 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 LINC00271P0C7V0 271 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 DNAJB2P25686 324 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 WNT7BP56706 349 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 ENPEPQ07075 957 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 JADE1Q6IE81 842 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 C11orf57Q6ZUT1 292 aaPredicted RBP24.51■■□□□ 1.51
LINC01116-201ENST00000295549 FAM186BQ8IYM0 893 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 KIF12Q96FN5 646 aa24.51■■□□□ 1.51
LINC01116-201ENST00000295549 FAM193BQ96PV7 902 aaPredicted RBP24.51■■□□□ 1.51
LINC01116-201ENST00000295549 NAT10Q9H0A0 1025 aaKnown RBP24.51■■□□□ 1.51
LINC01116-201ENST00000295549 DNAJC25Q9H1X3 360 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms