RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
CCDC116-201ENST00000292779 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
CCDC116-201ENST00000292779 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
CCDC116-201ENST00000292779 TCRBV7S2A1N4TA0A589 114 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 SPOPO43791 374 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 ERLIN2O94905 339 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 KCNA2P16389 499 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 KRT71Q3SY84 523 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 ZDHHC24Q6UX98 284 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 DDX1Q92499 740 aaKnown RBP16.17■□□□□ 0.18
CCDC116-201ENST00000292779 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 PI4K2AQ9BTU6 479 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 C17orf75Q9HAS0 396 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 AS3MTQ9HBK9 375 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 PCYOX1Q9UHG3 505 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 WDR90Q96KV7 1748 aa16.17■□□□□ 0.18
CCDC116-201ENST00000292779 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 HNRNPDLO14979 420 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 MAFGO15525 162 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 SORBS3O60504 671 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 CALCAP01258 141 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 DRG2P55039 364 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 IFFO1Q0D2I5 559 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 FBXO25Q8TCJ0 367 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 ATP6V0A1Q93050 837 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 EPB41L4BQ9H329 900 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 SLC12A6Q9UHW9 1150 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 GGPS1O95749 300 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 GTF2H1P32780 548 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 DSG3P32926 999 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 RPL21P46778 160 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 SLC20A2Q08357 652 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 SPDYCQ5MJ68 293 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 CCDC137Q6PK04 289 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 B4GALNT4Q76KP1 1039 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 GPD1LQ8N335 351 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 ZNF473Q8WTR7 871 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 FAM213AQ9BRX8 229 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 GRHL1Q9NZI5 618 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 CNOT8Q9UFF9 292 aaKnown RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 SEPT9Q9UHD8 586 aaPredicted RBP16.16■□□□□ 0.18
CCDC116-201ENST00000292779 PCDHA3Q9Y5H8 950 aa16.16■□□□□ 0.18
CCDC116-201ENST00000292779 E7EVH7 732 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 KRT5P13647 590 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PMS2P54278 862 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PPP2R2AP63151 447 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 ACAD10Q6JQN1 1059 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 USP37Q86T82 979 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 SLC13A5Q86YT5 568 aaPredicted RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 CCDC60Q8IWA6 550 aaPredicted RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PPM1EQ8WY54 764 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 BICD1Q96G01 975 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 CCT8L2Q96SF2 557 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PPANQ9NQ55 473 aaKnown RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 TMEM51Q9NW97 253 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 UVRAGQ9P2Y5 699 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 A0A087WUV0 522 aaPredicted RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 DGAT1O75907 488 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PSAPP07602 524 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 TMOD1P28289 359 aa16.15■□□□□ 0.18
CCDC116-201ENST00000292779 EIF3BP55884 814 aaKnown RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 MAGOHP61326 146 aaKnown RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 JPH1Q9HDC5 661 aaPredicted RBP16.15■□□□□ 0.18
CCDC116-201ENST00000292779 PODXLO00592 558 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 SHBGP04278 402 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 GARTP22102 1010 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 OAZ1P54368 228 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 PRKCEQ02156 737 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CLEC16AQ2KHT3 1053 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 USP50Q70EL3 339 aaPredicted RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 TADA2BQ86TJ2 420 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 PABPC3Q9H361 631 aaKnown RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 A1CFQ9NQ94 594 aaKnown RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CYP26B1Q9NR63 512 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 PTPRFP10586 1907 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 SRRM3A6NNA2 597 aaPredicted RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 FAM107AO95990 144 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 RARAP10276 462 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 COILP38432 576 aaPredicted RBP16.14■□□□□ 0.17
CCDC116-201ENST00000292779 RWDD2BP57060 319 aa16.14■□□□□ 0.17
CCDC116-201ENST00000292779 SIX1Q15475 284 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms