RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 SMIM28A0A1B0GU29 152 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 CCDC195A0A1B0GUA6 201 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 SLC26A4O43511 780 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 TGM5O43548 720 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 BRD1O95696 1058 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 BMP15O95972 392 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 MYBP10242 640 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 RPL17P18621 184 aaKnown RBP11.48□□□□□ -0.57
SNF8-201ENST00000290330 PROZP22891 400 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 UBA7P41226 1012 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 OSTNP61366 133 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 CREMQ03060 361 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 GRIN1Q05586 938 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 SF3A1Q15459 793 aaKnown RBP11.48□□□□□ -0.57
SNF8-201ENST00000290330 ARSHQ5FYA8 562 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 FAM171A1Q5VUB5 890 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 LILRA6Q6PI73 481 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PRSS55Q6UWB4 352 aaPredicted RBP11.48□□□□□ -0.57
SNF8-201ENST00000290330 ALKAL1Q6UXT8 129 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 CCDC149Q6ZUS6 474 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 ZBTB33Q86T24 672 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 GLYCTKQ8IVS8 523 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 TDRD5Q8NAT2 981 aaKnown RBP11.48□□□□□ -0.57
SNF8-201ENST00000290330 KREMEN2Q8NCW0 462 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PIK3R5Q8WYR1 880 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PBXIP1Q96AQ6 731 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 ASIC4Q96FT7 647 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 MFSD14AQ96MC6 490 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 TCHPQ9BT92 498 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
SNF8-201ENST00000290330 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
SNF8-201ENST00000290330 NPHP3-ACAD11A0A0J9YXS1 232 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 VPS37CA5D8V6 355 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 RFPL2O75678 378 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 B3GAT3O94766 335 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 PAPLNO95428 1278 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 MCF2P10911 925 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 PDCP20941 246 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 IGFBP6P24592 240 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 LONP1P36776 959 aaKnown RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 CLCNKBP51801 687 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 SMTNP53814 917 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 ELAVL2Q12926 359 aaKnown RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 STRN3Q13033 797 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 DCLRE1AQ6PJP8 1040 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 MPZL3Q6UWV2 235 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 CD300LGQ6UXG3 332 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 CEP57Q86XR8 500 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 LNX1Q8TBB1 728 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 LRRC15Q8TF66 581 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 ZNF707Q96C28 371 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 CALML4Q96GE6 196 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 ZBTB45Q96K62 511 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 ACAP3Q96P50 834 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 CLSTN3Q9BQT9 956 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 BLOC1S4Q9NUP1 217 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
SNF8-201ENST00000290330 SORCS3Q9UPU3 1222 aa11.47□□□□□ -0.57
SNF8-201ENST00000290330 MEFVO15553 781 aaPredicted RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 TOM1L1O75674 476 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 ASGR2P07307 311 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 SYT1P21579 422 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 FGFR3P22607 806 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 NCKAP1LP55160 1127 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 MTMR3Q13615 1198 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 KARSQ15046 597 aaKnown RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 PSMD5Q16401 504 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 UPP1Q16831 310 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 ZPBP2Q6X784 338 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 C3orf58Q8NDZ4 430 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 KCNN1Q92952 543 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 ACSF2Q96CM8 615 aaPredicted RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 SNX27Q96L92 541 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 UROC1Q96N76 676 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 ZMAT2Q96NC0 199 aaKnown RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
SNF8-201ENST00000290330 WDR6Q9NNW5 1121 aaKnown RBP11.46□□□□□ -0.57
SNF8-201ENST00000290330 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms