RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RASA4BC9J798 803 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 RASA4O43374 803 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 GFPT2O94808 682 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PGK2P07205 417 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 ADORA2AP29274 412 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PCYT1AP49585 367 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PPARGC1AQ9UBK2 798 aaKnown RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 HAUS5O94927 633 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 SERPINB4P48594 390 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 C10orf76Q5T2E6 689 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 PPM1KQ8N3J5 372 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 LRGUKQ96M69 825 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 GLI3P10071 1580 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DAPK3O43293 454 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 KCNA3P22001 575 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 PPP2R5CQ13362 524 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DSTYKQ6XUX3 929 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 TRIM42Q8IWZ5 723 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DTX3LQ8TDB6 740 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 PIGOQ8TEQ8 1089 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 SASH3O75995 380 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 TRPM8Q7Z2W7 1104 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 ELMOD1Q8N336 334 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 TEX9Q8N6V9 391 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 OR2W6PQ8NHA6 318 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 EIF2AK1Q9BQI3 630 aaKnown RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 HTATIP2Q9BUP3 242 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 SEL1LQ9UBV2 794 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 TCP11X1B4DZS4 312 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 CLDN3O15551 220 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DGAT1O75907 488 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 ERFP50548 548 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 ANTXR2P58335 489 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 RFX8Q6ZV50 586 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 KCTD17Q8N5Z5 321 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 MYCBPAPQ8TBZ2 947 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 XPO6Q96QU8 1125 aaKnown RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 MRPL4Q9BYD3 311 aaKnown RBP12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 ARL2BPQ9Y2Y0 163 aa12.08□□□□□ -0.48
NPC1L1-201ENST00000289547 TDP2O95551 362 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 ANP32DO95626 131 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 ASPHQ12797 758 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 SPATA21Q7Z572 469 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 C4BP0C0L5 1744 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 CNTNAP5Q8WYK1 1306 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 A0A1B0GTH6 734 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 POTEMA6NI47 508 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 PODXLO00592 558 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 CABYRO75952 493 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 CYP2C9P11712 490 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 TFAMQ00059 246 aaKnown RBP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 MOB2Q70IA6 237 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 DRC3Q9H069 523 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 ANXA13P27216 316 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 EEF1DP29692 281 aaKnown RBP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 PRCPP42785 496 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 BYSLQ13895 437 aaKnown RBP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 PDIA5Q14554 519 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 MMEL1Q495T6 779 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 LCA5Q86VQ0 697 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 APBA2Q99767 749 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 RHBDL2Q9NX52 303 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 EPS15L1Q9UBC2 864 aa12.07□□□□□ -0.48
NPC1L1-201ENST00000289547 LRRN2O75325 713 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 TGFB3P10600 412 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 CHN1P15882 459 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 LMNB2Q03252 620 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms