RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 CHORDC1Q9UHD1 332 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-201ENST00000285124 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 HLA-DRAP01903 254 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 TRPC3Q13507 836 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 IRF5Q13568 498 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 KIAA1328Q86T90 577 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 FBXL13Q8NEE6 735 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 CCDC112Q8NEF3 446 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 LPPQ93052 612 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 SIX2Q9NPC8 291 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 Q9Y3F1 56 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 UMODL1Q5DID0 1318 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 SMIM35A0A1B0GVV1 85 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 RPS6KA5O75582 802 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 IPO7O95373 1038 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 NFICP08651 508 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 HOXA11P31270 313 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 PTPN14Q15678 1187 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 ASIC2Q16515 512 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 AMHR2Q16671 573 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 LHX8Q68G74 356 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 ZPBP2Q6X784 338 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 TMTC1Q8IUR5 882 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 PPP1R13BQ96KQ4 1090 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.711e-10■■■■■ 30
PPP4R1-201ENST00000285124 GANQ9H2C0 597 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 CEP72Q9P209 647 aa10.6□□□□□ -0.71
PPP4R1-201ENST00000285124 MACROD2A1Z1Q3 448 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 IGHA2P01877 340 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 TFRCP02786 760 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 WEE2P0C1S8 567 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 CD52P31358 61 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 MYL6P60660 151 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 ARHGAP29Q52LW3 1261 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 WDR44Q5JSH3 913 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 SYT10Q6XYQ8 523 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 LINC01465Q8N7H1 131 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 CELF4Q9BZC1 486 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 AGO3Q9H9G7 860 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 PLCB1Q9NQ66 1216 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 CGNQ9P2M7 1197 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 MBLAC1A4D2B0 266 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 CYP26A1O43174 497 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 NDUFA10O95299 355 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 CHRNA1P02708 482 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 GNG11P61952 73 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 PPP2R3AQ06190 1150 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 USP37Q86T82 979 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 C12orf56Q8IXR9 622 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 EFCAB13Q8IY85 973 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 GOLGA2P5Q9HBQ8 144 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 TMEM8AQ9HCN3 771 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 APEX2Q9UBZ4 518 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 DNAI1Q9UI46 699 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 ST3GAL5Q9UNP4 418 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
PPP4R1-201ENST00000285124 KBTBD13C9JR72 458 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 EVI5O60447 810 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 AFF1P51825 1210 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 CDH8P55286 799 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 ADAM17P78536 824 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 PTK2Q05397 1052 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 MCL1Q07820 350 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 NCOA4Q13772 614 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 SPA17Q15506 151 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 TRAPPC11Q7Z392 1133 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 KLHDC9Q8NEP7 349 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 PXYLP1Q8TE99 480 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 NT5C1BQ96P26 610 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 DNAJC7Q99615 494 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 PLAGL2Q9UPG8 496 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 PTPN22Q9Y2R2 807 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 ADGRG1Q9Y653 693 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 COL1A2P08123 1366 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 A0A1W2PQ45 241 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 A0A1W2PQY0 241 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 ITGB3P05106 788 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 CCDC175P0C221 793 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 ABCB4P21439 1286 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 MYBPC2Q14324 1141 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 PSMD6Q15008 389 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 NFIL3Q16649 462 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 WDR72Q3MJ13 1102 aa10.58□□□□□ -0.72
PPP4R1-201ENST00000285124 ZNF618Q5T7W0 954 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms