RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SERPINB12Q96P63 405 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
SKA1-201ENST00000285116 EXOC3O60645 756 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 GAS7O60861 476 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 POLR2MP0CAP2 368 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 CHRNB2P17787 502 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 IFNAR2P48551 515 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 VAMP7P51809 220 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 PLTPP55058 493 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 TCP10Q12799 353 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 USH1GQ495M9 461 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CCDC137Q6PK04 289 aaKnown RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 UIMC1Q96RL1 719 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 YIPF3Q9GZM5 350 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SNX24Q9Y343 169 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 COQ4Q9Y3A0 265 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SMCHD1A6NHR9 2005 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SFI1A8K8P3 1242 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 FSCN2O14926 492 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CDC25CP30307 473 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CYP2J2P51589 502 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CAV1Q03135 178 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 AUHQ13825 339 aaKnown RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 TAF11Q15544 211 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 ASRGL1Q7L266 308 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 NLGN1Q8N2Q7 840 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 MAIP1Q8WWC4 291 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SHC3Q92529 594 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 KRT35Q92764 455 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 NAF1Q96HR8 494 aaKnown RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 ACCSQ96QU6 501 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 TEKT3Q9BXF9 490 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 ADAM22Q9P0K1 906 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CTTNBP2NLQ9P2B4 639 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 WRAP73Q9P2S5 460 aaPredicted RBP11.09□□□□□ -0.63
SKA1-201ENST00000285116 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
SKA1-201ENST00000285116 SMIM23A6NLE4 172 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 HIP1RO75146 1068 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 GJB6O95452 261 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 NEFHP12036 1026 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 COMTP21964 271 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 ATP5DP30049 168 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 HOXA13P31271 388 aaPredicted RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 SKIV2L2P42285 1042 aaKnown RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 STAT2P52630 851 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 GTF2BQ00403 316 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 PRPF4BQ13523 1007 aaKnown RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 APLFQ8IW19 511 aaPredicted RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 IWS1Q96ST2 819 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 TRIM7Q9C029 511 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 STK38LQ9Y2H1 464 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 ARL2BPQ9Y2Y0 163 aa11.08□□□□□ -0.63
SKA1-201ENST00000285116 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.63
SKA1-201ENST00000285116 ABLIM1O14639 778 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 ABL2P42684 1182 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 PTP4A2Q12974 167 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 ZNF211Q13398 564 aaPredicted RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 IKZF4Q9H2S9 585 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 A8MUI8 341 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 RASGRF2O14827 1237 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 ITIH2P19823 946 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 GTF2H1P32780 548 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 PPP3CAQ08209 521 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 KCTD19Q17RG1 926 aaPredicted RBP11.08□□□□□ -0.64
SKA1-201ENST00000285116 CCDC38Q502W7 563 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 SLC30A9Q6PML9 568 aa11.08□□□□□ -0.64
SKA1-201ENST00000285116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms