RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 UVSSAQ2YD98 709 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 KLK14Q9P0G3 267 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 LRRIQ3A6PVS8 624 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 IBSPP21815 317 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 CLDN10P78369 228 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 FANCCQ00597 558 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 POU5F1Q01860 360 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 SPAG1Q07617 926 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 IKBKEQ14164 716 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 RPUSD2Q8IZ73 545 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 GSTCDQ8NEC7 633 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 ZNF516Q92618 1163 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 FAM212AQ96EL1 285 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 VPS16Q9H269 839 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 GRPEL1Q9HAV7 217 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 TOPORSQ9NS56 1045 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 C1orf112Q9NSG2 853 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 PARP2Q9UGN5 583 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 CEP290O15078 2479 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 TULP1O00294 542 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 DLATP10515 647 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 COPB1P53618 953 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 FPGSQ05932 587 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 PPP3CAQ08209 521 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 DCAF17Q5H9S7 520 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 LMBRD2Q68DH5 695 aaPredicted RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 TMC2Q8TDI7 906 aa23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 ZMAT2Q96NC0 199 aaKnown RBP23.67■■□□□ 1.38
PDLIM3-203ENST00000284771 PFKMP08237 780 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 ITGA4P13612 1032 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 KRT13P13646 458 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 PRKCSHP14314 528 aaPredicted RBP23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 KCNH2Q12809 1159 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 MAN2A1Q16706 1144 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 XKR4Q5GH76 650 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 TCERG1LQ5VWI1 586 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 SCARA3Q6AZY7 606 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 FAM43BQ6ZT52 329 aaPredicted RBP23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 EFCAB13Q8IY85 973 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 TMEM130Q8N3G9 435 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 RNF169Q8NCN4 708 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 SNX27Q96L92 541 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 ZFP42Q96MM3 310 aa23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.66■■□□□ 1.38
PDLIM3-203ENST00000284771 EOMESO95936 686 aa23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 PPIGQ13427 754 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 ZNF365Q70YC5 407 aa23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 OTOP2Q7RTS6 562 aa23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 PLEKHA5Q9HAU0 1116 aa23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 INTS13Q9NVM9 706 aa23.65■■□□□ 1.38
PDLIM3-203ENST00000284771 LAMA2P24043 3122 aaKnown RBP23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 SERPINC1P01008 464 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 SKIP12755 728 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 YARSP54577 528 aaKnown RBP23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 VWA3BQ502W6 1294 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 OR5B17Q8NGF7 314 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 GAD1Q99259 594 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 NDST4Q9H3R1 872 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 ASB7Q9H672 318 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 MIOSQ9NXC5 875 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 CNTN3Q9P232 1028 aa23.64■■□□□ 1.38
PDLIM3-203ENST00000284771 RANBP2P49792 3224 aaKnown RBP23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 A0A1B0GTH6 734 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 ABHD14A-ACY1A0A1B0GW23 586 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 PTGESO14684 152 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 NFICP08651 508 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 MLH1P40692 756 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 PLCB2Q00722 1185 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 HSP90AA2PQ14568 343 aaPredicted RBP23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 CBWD6Q4V339 395 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 CBWD3Q5JTY5 395 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 GLRA4Q5JXX5 417 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 CBWD5Q5RIA9 395 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 JADE1Q6IE81 842 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 SARM1Q6SZW1 724 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 FNBP1Q96RU3 617 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 ELAC1Q9H777 363 aaKnown RBP23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 TMEM161AQ9NX61 479 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 IFNKQ9P0W0 207 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 PLAGL2Q9UPG8 496 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 GIT1Q9Y2X7 761 aa23.64■■□□□ 1.37
PDLIM3-203ENST00000284771 RALGAPA2Q2PPJ7 1873 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 SMIM28A0A1B0GU29 152 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 ARL5CA6NH57 179 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 TEX33O43247 280 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 IL18RAPO95256 599 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 FGFR1P11362 822 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 TNNI1P19237 187 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 GCLMP48507 274 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 PPP2R3AQ06190 1150 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 ENPEPQ07075 957 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 NR1I3Q14994 352 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 PTPN21Q16825 1174 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 TMEM240Q5SV17 173 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 PGBD4Q96DM1 585 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 CGRRF1Q99675 332 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 MMRN2Q9H8L6 949 aa23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 RSAD1Q9HA92 442 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms