RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GPNMBQ14956 572 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 LRRC8AQ8IWT6 810 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 FAM212AQ96EL1 285 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 CGRRF1Q99675 332 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 IPPQ9Y573 584 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 P4HA2O15460 535 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 TNNI1P19237 187 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 KCNMA1Q12791 1236 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 SLC10A6Q3KNW5 377 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 ZNF516Q92618 1163 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 TMEM117Q9H0C3 514 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 NXF3Q9H4D5 531 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 TMEM8AQ9HCN3 771 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 FAM105AQ9NUU6 356 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 SIK3Q9Y2K2 1263 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 HES2Q9Y543 173 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 PCDHB2Q9Y5E7 798 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 TTC26A0AVF1 554 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 MEFVO15553 781 aaPredicted RBP20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 MGEA5O60502 916 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 LRMPQ12912 555 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 KRT39Q6A163 491 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 GBP6Q6ZN66 633 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 WDR49Q8IV35 697 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 CCDC150Q8NCX0 1101 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 SMG8Q8ND04 991 aaKnown RBP20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 CRACR2AQ9BSW2 395 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 ASB7Q9H672 318 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 PLEKHA5Q9HAU0 1116 aa20.48■□□□□ 0.87
PDLIM3-202ENST00000284770 LACTBL1A8MY62 500 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 MXI1P50539 228 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 YARSP54577 528 aaKnown RBP20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 MYL7Q01449 175 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 CETN1Q12798 172 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 EXOC3L4Q17RC7 722 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 FAM43BQ6ZT52 329 aaPredicted RBP20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 CD302Q8IX05 232 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 PCMTD1Q96MG8 357 aaPredicted RBP20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 ADAM2Q99965 735 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 PTPRJQ12913 1337 aa20.47■□□□□ 0.87
PDLIM3-202ENST00000284770 CYP2C18P33260 490 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 KLK7P49862 253 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 RAB27AP51159 221 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 AP3M2P53677 418 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 CCL23P55773 120 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 PLEKHG4Q58EX7 1191 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 LMBRD2Q68DH5 695 aaPredicted RBP20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 C15orf39Q6ZRI6 1047 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 SV2AQ7L0J3 742 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 ZSCAN30Q86W11 494 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 FTHL17Q9BXU8 183 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 GCNT4Q9P109 453 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 A0A0U1RQF3 1178 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 ZNF623O75123 536 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 RECQL4O94761 1208 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 C4BPAP04003 597 aaKnown RBP20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 GYPCP04921 128 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 AKAP5P24588 427 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 TC2NQ8N9U0 490 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 SCLYQ96I15 445 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 RNF39Q9H2S5 420 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 COQ4Q9Y3A0 265 aa20.46■□□□□ 0.87
PDLIM3-202ENST00000284770 CXCL10P02778 98 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 PON1P27169 355 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 DUOXA2Q1HG44 320 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 ZACNQ401N2 412 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 ALKAL1Q6UXT8 129 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 MRPL10Q7Z7H8 261 aaKnown RBP20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 HACE1Q8IYU2 909 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 DBF4BQ8NFT6 615 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 OR5B17Q8NGF7 314 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 SNX27Q96L92 541 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 NUP58Q9BVL2 599 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 APOL6Q9BWW8 343 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 RGS18Q9NS28 235 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 PARP2Q9UGN5 583 aa20.45■□□□□ 0.86
PDLIM3-202ENST00000284770 SKIP12755 728 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 SLC9A1P19634 815 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 CCZ1BP86790 482 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 CCZ1P86791 482 aaPredicted RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 GOLGA8FQ08AF8 430 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 GOLGA8DPQ0D2H9 430 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 TRIM14Q14142 442 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 EPC2Q52LR7 807 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 JADE1Q6IE81 842 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 RTN4RL1Q86UN2 441 aaPredicted RBP20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 NT5DC4Q86YG4 428 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 EFCAB13Q8IY85 973 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 EHBP1Q8NDI1 1231 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 FBXL13Q8NEE6 735 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 SEPT8Q92599 483 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 APBB2Q92870 758 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 FAM84AQ96KN4 292 aa20.44■□□□□ 0.86
PDLIM3-202ENST00000284770 FAM207AQ9NSI2 230 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms