RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ELAVL2Q12926 359 aaKnown RBP14.05□□□□□ -0.16
CD44-203ENST00000278386 ATF7IP2Q5U623 682 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 PIK3R5Q8WYR1 880 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 PRKD2Q9BZL6 878 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 CXCL16Q9H2A7 254 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 EPS15L1Q9UBC2 864 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 CA14Q9ULX7 337 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 PHLPP2Q6ZVD8 1323 aa14.05□□□□□ -0.16
CD44-203ENST00000278386 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 ST18O60284 1047 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 ZMYND10O75800 440 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 C1RP00736 705 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 C8AP07357 584 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 AOC1P19801 751 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 PPM1LQ5SGD2 360 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 PDXDC1Q6P996 788 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 LILRA6Q6PI73 481 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.04□□□□□ -0.16
CD44-203ENST00000278386 POLIQ9UNA4 740 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
CD44-203ENST00000278386 DMDP11532 3685 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 K7ERI5 159 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 YARSP54577 528 aaKnown RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 PEX3P56589 373 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 PTGDRQ13258 359 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 DMP1Q13316 513 aaPredicted RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 NAB2Q15742 525 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 ZNF568Q3ZCX4 644 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 KRT79Q5XKE5 535 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 GRASPQ7Z6J2 395 aaPredicted RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 ST13P5Q8NFI4 369 aaPredicted RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 LNX1Q8TBB1 728 aaPredicted RBP14.03□□□□□ -0.16
CD44-203ENST00000278386 RTP3Q9BQQ7 232 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 CLSTN3Q9BQT9 956 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 GOLGA2P5Q9HBQ8 144 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
CD44-203ENST00000278386 PP2D1A8MPX8 630 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 E9PMD0 336 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 CCL16O15467 120 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 HIP1RO75146 1068 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 XYLBO75191 536 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 B3GAT3O94766 335 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.17
CD44-203ENST00000278386 SRFP11831 508 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 HARSP12081 509 aaKnown RBP14.02□□□□□ -0.17
CD44-203ENST00000278386 LAMP2P13473 410 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 NPR3P17342 541 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 FSHRP23945 695 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.17
CD44-203ENST00000278386 CLCNKBP51801 687 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 OSTNP61366 133 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
CD44-203ENST00000278386 MCTP1Q6DN14 999 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 CCDC105Q8IYK2 499 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 C4orf32Q8N8J7 132 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 CEP120Q8N960 986 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 IGSF22Q8N9C0 903 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 SLC7A14Q8TBB6 771 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 NXPE3Q969Y0 559 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 UROC1Q96N76 676 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 PPP1R10Q96QC0 940 aaKnown RBP14.02□□□□□ -0.17
CD44-203ENST00000278386 CCDC94Q9BW85 323 aaPredicted RBP14.02□□□□□ -0.17
CD44-203ENST00000278386 CDT1Q9H211 546 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 KMT5AQ9NQR1 393 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 TOPORSQ9NS56 1045 aaPredicted RBP14.02□□□□□ -0.17
CD44-203ENST00000278386 DNM3Q9UQ16 869 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 NUMBLQ9Y6R0 609 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 NOTCH4Q99466 2003 aa14.02□□□□□ -0.17
CD44-203ENST00000278386 TMEM189-UBE2V1I3L0A0 370 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 LAD1O00515 517 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 ADAM12O43184 909 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 PI15O43692 258 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 PAPLNO95428 1278 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 OR1D2P34982 312 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 NPTX2P47972 431 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 NTHL1P78549 312 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 HTR4Q13639 388 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 PDIA5Q14554 519 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 SLC44A3Q8N4M1 653 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 GPR152Q8TDT2 470 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 DRC1Q96MC2 740 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 RUSC1Q9BVN2 902 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
CD44-203ENST00000278386 TBC1D17Q9HA65 648 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 MTRRQ9UBK8 725 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 WNT16Q9UBV4 365 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 CDY1Q9Y6F8 540 aa14.01□□□□□ -0.17
CD44-203ENST00000278386 KRBA1A5PL33 1030 aa14□□□□□ -0.17
CD44-203ENST00000278386 I3L4J1 428 aa14□□□□□ -0.17
CD44-203ENST00000278386 TRAPPC3O43617 180 aa14□□□□□ -0.17
CD44-203ENST00000278386 FGFR3P22607 806 aa14□□□□□ -0.17
CD44-203ENST00000278386 TKTP29401 623 aaKnown RBP14□□□□□ -0.17
CD44-203ENST00000278386 CDC25AP30304 524 aa14□□□□□ -0.17
CD44-203ENST00000278386 NBL1P41271 181 aa14□□□□□ -0.17
CD44-203ENST00000278386 GRM5P41594 1212 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms