RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FZD8Q9H461 694 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 EHD2Q9NZN4 543 aa10.33□□□□□ -0.76
TRIM55-201ENST00000276573 PACSIN2Q9UNF0 486 aaPredicted RBP10.33□□□□□ -0.76
TRIM55-201ENST00000276573 PTPRJQ12913 1337 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 OGTO15294 1046 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PPFIA4O75335 1185 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ERLIN1O75477 346 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 CYP11B1P15538 503 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MAPK4P31152 587 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ADCYAP1R1P41586 468 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MCL1Q07820 350 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 LONRF2Q1L5Z9 754 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 FAM110CQ1W6H9 321 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 SEZ6Q53EL9 994 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 BEND6Q5SZJ8 279 aaPredicted RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 METTL13Q8N6R0 699 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PPTC7Q8NI37 304 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 DHX38Q92620 1227 aaKnown RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MAML3Q96JK9 1138 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PBKQ96KB5 322 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TCHPQ9BT92 498 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 THAP2Q9H0W7 228 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 GOLPH3Q9H4A6 298 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ACP6Q9NPH0 428 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 SMARCAL1Q9NZC9 954 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ACKR2O00590 384 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ABLIM1O14639 778 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MAGEB2O15479 319 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 FAM189A1O60320 539 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 BUB1BO60566 1050 aaPredicted RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 C22orf31O95567 290 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TBC1D8O95759 1140 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 GJB1P08034 283 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MMEP08473 750 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 HARSP12081 509 aaKnown RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 MCM3P25205 808 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TNFSF9P41273 254 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PIK3CAP42336 1068 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 CLCN3P51790 818 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 HADHBP55084 474 aaKnown RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PTENP60484 403 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 GPC5P78333 572 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 CBX1P83916 185 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 FMO1Q01740 532 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 CDR2Q01850 454 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 POU5F1BQ06416 359 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 GRM1Q13255 1194 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 BIRC3Q13489 604 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TSHZ1Q6ZSZ6 1077 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PEX26Q7Z412 305 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 DAAM2Q86T65 1068 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 NT5DC3Q86UY8 548 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 BRSK2Q8IWQ3 736 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 DDX1Q92499 740 aaKnown RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 ZBTB10Q96DT7 871 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 CALR3Q96L12 384 aaKnown RBP10.32□□□□□ -0.76
TRIM55-201ENST00000276573 TINF2Q9BSI4 451 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PTPRHQ9HD43 1115 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 OSGEPQ9NPF4 335 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 AMFRQ9UKV5 643 aa10.32□□□□□ -0.76
TRIM55-201ENST00000276573 SLC15A5A6NIM6 579 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 KCNK3O14649 394 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 PROZP22891 400 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 DNA2P51530 1060 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 AP3M2P53677 418 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 IGBP1P78318 339 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 IQSEC1Q6DN90 963 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 CCDC70Q6NSX1 233 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 RHOT2Q8IXI1 618 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 LINC01465Q8N7H1 131 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 OR5B17Q8NGF7 314 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 NPLOC4Q8TAT6 608 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 ZNF668Q96K58 619 aaPredicted RBP10.31□□□□□ -0.76
TRIM55-201ENST00000276573 NLRP4Q96MN2 994 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 C16orf70Q9BSU1 422 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 LRRC1Q9BTT6 524 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 SELENOOQ9BVL4 669 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 ABHD16BQ9H3Z7 469 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
TRIM55-201ENST00000276573 CPSF3Q9UKF6 684 aaKnown RBP10.31□□□□□ -0.76
TRIM55-201ENST00000276573 L1RE1Q9UN81 338 aa10.31□□□□□ -0.76
TRIM55-201ENST00000276573 PHACTR2O75167 634 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 ITGBL1O95965 494 aaPredicted RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 KRT5P13647 590 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 SMPD1P17405 629 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 ACO1P21399 889 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 PDE6CP51160 858 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 BPIFB4P59827 614 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 SURF1Q15526 300 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 DUSP28Q4G0W2 176 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms