RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ZBTB33Q86T24 672 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 LARP4BQ92615 738 aaKnown RBP15.83■□□□□ 0.12
HMGN3-201ENST00000275036 COLEC11Q9BWP8 271 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 EMILIN2Q9BXX0 1053 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 ZSCAN16Q9H4T2 348 aaPredicted RBP15.83■□□□□ 0.12
HMGN3-201ENST00000275036 RXFP1Q9HBX9 757 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 STK39Q9UEW8 545 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 ADAM28Q9UKQ2 775 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.12
HMGN3-201ENST00000275036 NR1I2O75469 434 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 THP07101 528 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 MYBP10242 640 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 GRM5P41594 1212 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 ZNF131P52739 623 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 OSTNP61366 133 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 ZXDAP98168 799 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
HMGN3-201ENST00000275036 RTP2Q5QGT7 225 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 CES5AQ6NT32 575 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
HMGN3-201ENST00000275036 FIZ1Q96SL8 496 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 SFXN1Q9H9B4 322 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
HMGN3-201ENST00000275036 ANK1P16157 1881 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 ZNF318Q5VUA4 2279 aa15.82■□□□□ 0.12
HMGN3-201ENST00000275036 BRD1O95696 1058 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 MCF2P10911 925 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 RPL17P18621 184 aaKnown RBP15.81■□□□□ 0.12
HMGN3-201ENST00000275036 DDIT3P35638 169 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 MTHFRP42898 656 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 NASPP49321 788 aaPredicted RBP15.81■□□□□ 0.12
HMGN3-201ENST00000275036 SMTNP53814 917 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 PTPN21Q16825 1174 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
HMGN3-201ENST00000275036 MPZL3Q6UWV2 235 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 CD300LGQ6UXG3 332 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 ALKAL1Q6UXT8 129 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 TRIM67Q6ZTA4 783 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 HAUS6Q7Z4H7 955 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 GPR149Q86SP6 731 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
HMGN3-201ENST00000275036 KCNN1Q92952 543 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 NECTIN4Q96NY8 510 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 SMOC2Q9H3U7 446 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 GOLGA2P5Q9HBQ8 144 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 MAN1C1Q9NR34 630 aa15.81■□□□□ 0.12
HMGN3-201ENST00000275036 LARSQ9P2J5 1176 aaKnown RBP15.81■□□□□ 0.12
HMGN3-201ENST00000275036 WDFY4Q6ZS81 3184 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 A0A087X0B3 334 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SMIM28A0A1B0GU29 152 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 TADA2AO75478 443 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SPATA31D3P0C874 917 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 HARSP12081 509 aaKnown RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SOX4Q06945 474 aaPredicted RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 STRN3Q13033 797 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SEZ6Q53EL9 994 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 PRSS55Q6UWB4 352 aaPredicted RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SPATA31D4Q6ZUB0 917 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 RIN2Q8WYP3 895 aaPredicted RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 SNX27Q96L92 541 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 RIPOR3Q96MK2 946 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 ZMAT2Q96NC0 199 aaKnown RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 TCHPQ9BT92 498 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 CCDC94Q9BW85 323 aaPredicted RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 ANKFY1Q9P2R3 1169 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 TFIP11Q9UBB9 837 aaKnown RBP15.8■□□□□ 0.12
HMGN3-201ENST00000275036 HCN4Q9Y3Q4 1203 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 MUC6Q6W4X9 2439 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 TCHHQ07283 1943 aa15.8■□□□□ 0.12
HMGN3-201ENST00000275036 TMEM221A6NGB7 291 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 M0R296 226 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 TGM5O43548 720 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 TOM1L1O75674 476 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 RFPL2O75678 378 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 FAM13AO94988 1023 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 ADH1AP07327 375 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 NMT1P30419 496 aaKnown RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 PLA2G5P39877 138 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 PKP1Q13835 747 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 NOLC1Q14978 699 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 USP41Q3LFD5 358 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 APBB1IPQ7Z5R6 666 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
HMGN3-201ENST00000275036 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
HMGN3-201ENST00000275036 C3orf58Q8NDZ4 430 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms