RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SNX24Q9Y343 169 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 BUD23O43709 281 aaKnown RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 AP1G1O43747 822 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 HNRNPCL1O60812 293 aaKnown RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 PTCD1O75127 700 aaKnown RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 UQCRBP14927 111 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 ENTPD1P49961 510 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 CHN2P52757 468 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 DLG1Q12959 904 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 DNAJC3Q13217 504 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 ELMSAN1Q6PJG2 1045 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 UGT2A3Q6UWM9 527 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 CLNKQ7Z7G1 428 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 MTDHQ86UE4 582 aaKnown RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 PDSS2Q86YH6 399 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 CRACR2BQ8N4Y2 399 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 OR6Y1Q8NGX8 325 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 ANKRD36BP1Q96IX9 119 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 TTC1Q99614 292 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 MYL10Q9BUA6 226 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 SLCO1B3Q9NPD5 702 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 UVRAGQ9P2Y5 699 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 TTC7AQ9ULT0 858 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-201ENST00000274071 NHSL1Q5SYE7 1610 aa9.79□□□□□ -0.84
PDGFC-201ENST00000274071 ARHGAP10A1A4S6 786 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 A8MXQ7 604 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ADCY6O43306 1168 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 BAG2O95816 211 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 FUCA1P04066 466 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 LDHCP07864 332 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 RCVRNP35243 200 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ASPHQ12797 758 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ACAP1Q15027 740 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PDK3Q15120 406 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CCSAPQ6IQ19 270 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 RAPH1Q70E73 1250 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 LRRC49Q8IUZ0 686 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 GLG1Q92896 1179 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SKA1Q96BD8 255 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CYTH2Q99418 400 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ROPN1BQ9BZX4 212 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 KLHL4Q9C0H6 718 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ROPN1Q9HAT0 212 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PARVBQ9HBI1 364 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 NDE1Q9NXR1 346 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 BTG4Q9NY30 223 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PCDHB2Q9Y5E7 798 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PSMA7O14818 248 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 USP1O94782 785 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TFCP2Q12800 502 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SFT2D3Q587I9 215 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 ARHGEF18Q6ZSZ5 1173 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CCDC125Q86Z20 511 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 RASGEF1CQ8N431 466 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PYROXD1Q8WU10 500 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 C10orf82Q8WW14 230 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CRNKL1Q9BZJ0 848 aaKnown RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 GRIP2Q9C0E4 1043 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TMEM60Q9H2L4 133 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TAS2R1Q9NYW7 299 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CEP72Q9P209 647 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SEL1LQ9UBV2 794 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 MYH4Q9Y623 1939 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 A0A088AWK7 358 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 H3BSA7 217 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 APOEP02649 317 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 KPNA1P52294 538 aaPredicted RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 RAB15P59190 212 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 DR1Q01658 176 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 NR1D2Q14995 579 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 EXOC3L4Q17RC7 722 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 LRRC36Q1X8D7 754 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 SLC45A4Q5BKX6 768 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TRPC4APQ8TEL6 797 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 LRRC27Q9C0I9 530 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
PDGFC-201ENST00000274071 TRNAU1APQ9NX07 287 aaKnown RBP9.78□□□□□ -0.84
PDGFC-201ENST00000274071 PFASO15067 1338 aa9.77□□□□□ -0.84
PDGFC-201ENST00000274071 ANKRD34BA5PLL1 514 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 KIAA0391O15091 583 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 MAGEB2O15479 319 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 TEX28O15482 410 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 ZBTB43O43298 467 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 TLR2O60603 784 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 DNAJC6O75061 913 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 OCM2P0CE71 109 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 OCMP0CE72 109 aaPredicted RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 GNA11P29992 359 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PHBP35232 272 aa9.77□□□□□ -0.85
PDGFC-201ENST00000274071 NOP14P78316 857 aaKnown RBP9.77□□□□□ -0.85
PDGFC-201ENST00000274071 PLCB3Q01970 1234 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms