RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 BMPR1AP36894 532 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 GATMP50440 423 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 KCNA1Q09470 495 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 LAMTOR4Q0VGL1 99 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 ZC2HC1CQ53FD0 456 aaPredicted RBP26.78■■□□□ 1.88
SSBP4-201ENST00000270061 CEP135Q66GS9 1140 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 MCPH1Q8NEM0 835 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 KIFAP3Q92845 792 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 CCDC51Q96ER9 411 aa26.78■■□□□ 1.88
SSBP4-201ENST00000270061 MRPL42Q9Y6G3 142 aaKnown RBP26.78■■□□□ 1.88
SSBP4-201ENST00000270061 C5orf67F2Z3F1 127 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 ASAP2O43150 1006 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 GYPCP04921 128 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 RB1P06400 928 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 SRGAP2CP0DJJ0 459 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 ADKP55263 362 aaKnown RBP26.77■■□□□ 1.88
SSBP4-201ENST00000270061 SKIV2LQ15477 1246 aaKnown RBP26.77■■□□□ 1.88
SSBP4-201ENST00000270061 FKBP15Q5T1M5 1219 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 MAEAQ7L5Y9 396 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 CNGA4Q8IV77 575 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 XPNPEP1Q9NQW7 623 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 CHST12Q9NRB3 414 aa26.77■■□□□ 1.88
SSBP4-201ENST00000270061 PES1O00541 588 aaKnown RBP26.76■■□□□ 1.88
SSBP4-201ENST00000270061 CCDC40Q4G0X9 1142 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 FAM102BQ5T8I3 360 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 FRMD5Q7Z6J6 570 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 TMEM139Q8IV31 216 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 GOLGA5Q8TBA6 731 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 C11orf84Q9BUA3 381 aaPredicted RBP26.76■■□□□ 1.88
SSBP4-201ENST00000270061 NUP58Q9BVL2 599 aa26.76■■□□□ 1.88
SSBP4-201ENST00000270061 STX10O60499 249 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 MFAP3LO75121 409 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 NR3C1P04150 777 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 NCKAP1LP55160 1127 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 MXD4Q14582 209 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-201ENST00000270061 PTPROQ16827 1216 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 CATSPER4Q7RTX7 472 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 TRIM59Q8IWR1 403 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 TMEM174Q8WUU8 243 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 IQCDQ96DY2 449 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 NTPCRQ9BSD7 190 aaKnown RBP26.76■■□□□ 1.87
SSBP4-201ENST00000270061 TMEM206Q9H813 350 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 THEGQ9P2T0 379 aa26.76■■□□□ 1.87
SSBP4-201ENST00000270061 TBKBP1A7MCY6 615 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 K7ENM7 598 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 SLC16A3O15427 465 aaKnown RBP26.75■■□□□ 1.87
SSBP4-201ENST00000270061 CASP14P31944 242 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 GTF2BQ00403 316 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 GOLGA8FQ08AF8 430 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 GOLGA8DPQ0D2H9 430 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 MYBPC2Q14324 1141 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 SRGAP1Q7Z6B7 1085 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 ECHDC2Q86YB7 292 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 RNF149Q8NC42 400 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 MRPL38Q96DV4 380 aaKnown RBP26.75■■□□□ 1.87
SSBP4-201ENST00000270061 PLVAPQ9BX97 442 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 GBP3Q9H0R5 595 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 PIN4Q9Y237 131 aaKnown RBP26.75■■□□□ 1.87
SSBP4-201ENST00000270061 ATG2AQ2TAZ0 1938 aa26.75■■□□□ 1.87
SSBP4-201ENST00000270061 A0A0U1RQF3 1178 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 FGFR1P11362 822 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 FIGNQ5HY92 759 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 HS2ST1Q7LGA3 356 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 C17orf53Q8N3J3 647 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 SPIRE2Q8WWL2 714 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 BAG1Q99933 345 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 GPRC5CQ9NQ84 441 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 CGNQ9P2M7 1197 aaKnown RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 HOXA2O43364 376 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 PPP2R3AQ06190 1150 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 TWF2Q6IBS0 349 aaKnown RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 NAA15Q9BXJ9 866 aaKnown RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 METTL14Q9HCE5 456 aaKnown RBP26.74■■□□□ 1.87
SSBP4-201ENST00000270061 DMAC2Q9NW81 257 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 KCNG1Q9UIX4 513 aa26.74■■□□□ 1.87
SSBP4-201ENST00000270061 FECHP22830 423 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 SNRPFP62306 86 aaKnown RBP26.73■■□□□ 1.87
SSBP4-201ENST00000270061 SYCP1Q15431 976 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 SLC9A9Q8IVB4 645 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 RNF169Q8NCN4 708 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 HVCN1Q96D96 273 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 ACCSQ96QU6 501 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 MKNK1Q9BUB5 465 aa26.73■■□□□ 1.87
SSBP4-201ENST00000270061 ARHGAP6O43182 974 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 EOMESO95936 686 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 PHKA2P46019 1235 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 SMTNP53814 917 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 PEX3P56589 373 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 TFDP1Q14186 410 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 HAUS6Q7Z4H7 955 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 ABI1Q8IZP0 508 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 CPLX3Q8WVH0 158 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 ATXN2LQ8WWM7 1075 aaKnown RBP26.72■■□□□ 1.87
SSBP4-201ENST00000270061 MINDY3Q9H8M7 445 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 CAPN11Q9UMQ6 739 aa26.72■■□□□ 1.87
SSBP4-201ENST00000270061 DMP1Q13316 513 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-201ENST00000270061 SPOUT1Q5T280 376 aaKnown RBP26.71■■□□□ 1.87
SSBP4-201ENST00000270061 TRAIPQ9BWF2 469 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 TTYH3Q9C0H2 523 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 TMEM117Q9H0C3 514 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms