RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CSDE1O75534 798 aaKnown RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 PNMA6AP0CW24 399 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 GNAT1P11488 350 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 GFPT1Q06210 699 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 WDR49Q8IV35 697 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 CD99L2Q8TCZ2 262 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 PPP1R13LQ8WUF5 828 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 IFIH1Q9BYX4 1025 aaKnown RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 FAM49AQ9H0Q0 323 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 SPC25Q9HBM1 224 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 HDAC6Q9UBN7 1215 aa17.68■□□□□ 0.42
TPM1-201ENST00000267996 TRIP12Q14669 1992 aaPredicted RBP17.68■□□□□ 0.42
TPM1-201ENST00000267996 A0A087X0T9 212 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 C17orf102A2RUQ5 167 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 TREHO43280 583 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 VNN1O95497 513 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 GNRH1P01148 92 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 HLA-DRAP01903 254 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 FAM228BP0C875 321 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 PRKAR2AP13861 404 aaKnown RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 ELNP15502 786 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 MAGEA1P43355 309 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.424e-6■□□□□ 10.4
TPM1-201ENST00000267996 ENOX2Q16206 610 aaKnown RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 ARHGAP44Q17R89 818 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 LMBRD2Q68DH5 695 aaPredicted RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 KLHDC9Q8NEP7 349 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 OR5B17Q8NGF7 314 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 SHC3Q92529 594 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 FAM84AQ96KN4 292 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 FAM81BQ96LP2 452 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 TSGA10Q9BZW7 698 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 TRIM10Q9UDY6 481 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 TFR2Q9UP52 801 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 THSD7BQ9C0I4 1608 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 KRT86O43790 486 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 B4GALT4O60513 344 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 PGK1P00558 417 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 YY1P25490 414 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 CCND3P30281 292 aaPredicted RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 MFAP3P55082 362 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 GCNT1Q02742 428 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 TMEM132AQ24JP5 1023 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 ENOSF1Q7L5Y1 443 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 CDR2LQ86X02 465 aaPredicted RBP17.67■□□□□ 0.42
TPM1-201ENST00000267996 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 FAM71AQ8IYT1 594 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 KAT5Q92993 513 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 TATDN2Q93075 761 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 ADAMTS1Q9UHI8 967 aa17.67■□□□□ 0.42
TPM1-201ENST00000267996 ATP8B3O60423 1300 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 HMGCRP04035 888 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 CLTAP09496 248 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 DARSP14868 501 aaKnown RBP17.66■□□□□ 0.42
TPM1-201ENST00000267996 CST5P28325 142 aaPredicted RBP17.66■□□□□ 0.42
TPM1-201ENST00000267996 KYAT1Q16773 422 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 C10orf76Q5T2E6 689 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 PPM1KQ8N3J5 372 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 NME8Q8N427 588 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 CEP120Q8N960 986 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 SLC30A5Q8TAD4 765 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 DNAJB3Q8WWF6 145 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 CDHR5Q9HBB8 845 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 ANK1P16157 1881 aa17.66■□□□□ 0.42
TPM1-201ENST00000267996 ERLIN2O94905 339 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 IL18RAPO95256 599 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 CASQ1P31415 396 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 BMS1Q14692 1282 aaKnown RBP17.65■□□□□ 0.42
TPM1-201ENST00000267996 ZNF569Q5MCW4 686 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 CCSAPQ6IQ19 270 aaPredicted RBP17.65■□□□□ 0.42
TPM1-201ENST00000267996 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 PXYLP1Q8TE99 480 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 CPB2Q96IY4 423 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 PI4K2AQ9BTU6 479 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 L2HGDHQ9H9P8 463 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 RPF1Q9H9Y2 349 aaKnown RBP17.65■□□□□ 0.42
TPM1-201ENST00000267996 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
TPM1-201ENST00000267996 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 GUCA1BQ9UMX6 200 aa17.65■□□□□ 0.42
TPM1-201ENST00000267996 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.42
TPM1-201ENST00000267996 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.422e-8■■■■□ 19.9
TPM1-201ENST00000267996 RIOK3O14730 519 aaKnown RBP17.64■□□□□ 0.42
TPM1-201ENST00000267996 STAG3L1P0CL83 205 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 HOXA11P31270 313 aaPredicted RBP17.64■□□□□ 0.42
TPM1-201ENST00000267996 PIK3CAP42336 1068 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms