RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 NR1H4Q96RI1 486 aaPredicted RBP20.39■□□□□ 0.86
NECTIN1-201ENST00000264025 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.86
NECTIN1-201ENST00000264025 DGAT1O75907 488 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 SYF2O95926 243 aaKnown RBP20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 LRRC8EQ6NSJ5 796 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 UVRAGQ9P2Y5 699 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 APEX2Q9UBZ4 518 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 GTPBP10A4D1E9 387 aaKnown RBP20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 SULT1E1P49888 294 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 KDM4CQ9H3R0 1056 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 WDR35Q9P2L0 1181 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 NPHP3-ACAD11A0A0J9YXS1 232 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 PDHA1P08559 390 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 DDX5P17844 614 aaKnown RBP20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 STK33Q9BYT3 514 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 SNX12Q9UMY4 172 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 SLC4A7Q9Y6M7 1214 aa20.39■□□□□ 0.85
NECTIN1-201ENST00000264025 SYNDIG1LA6NDD5 238 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 KCNN4O15554 427 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 CUL3Q13618 768 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 XKR3Q5GH77 459 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 EFHBQ8N7U6 833 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 ATXN7L3BQ96GX2 97 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 DYRK4Q9NR20 520 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 PIN4Q9Y237 131 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 HMGCS2P54868 508 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 SCARF1Q14162 830 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 SLC18A3Q16572 532 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 ANKMY2Q8IV38 441 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 RARS2Q5T160 578 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 CNPY4Q8N129 248 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 NSUN4Q96CB9 384 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 TRABDQ9H4I3 376 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 ABCA8O94911 1581 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 IL10P22301 178 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 PPP4R4Q6NUP7 873 aa20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
NECTIN1-201ENST00000264025 HDAC4P56524 1084 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 SESN2P58004 480 aaPredicted RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 CDC42EP1Q00587 391 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 EXOSC10Q01780 885 aaKnown RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 EPC1Q9H2F5 836 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 AGAP1Q9UPQ3 857 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 TRAPPC3O43617 180 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 RBP5P82980 135 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 PATL1Q86TB9 770 aaKnown RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 PHF20Q9BVI0 1012 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 RUBCNLQ9H714 662 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 C3orf70A6NLC5 250 aaPredicted RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 GRIK1P39086 918 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 RRM2BQ7LG56 351 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 OR6J1Q8NGC5 347 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 AGR3Q8TD06 166 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 GFAPP14136 432 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 SERPINB4P48594 390 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 TRADDQ15628 312 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 SCFD1Q8WVM8 642 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 SENP7Q9BQF6 1050 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 MTMR4Q9NYA4 1195 aa20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 SMG5Q9UPR3 1016 aaKnown RBP20.37■□□□□ 0.85
NECTIN1-201ENST00000264025 PSMD3O43242 534 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 AGTP01019 485 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 CYP2C19P33261 490 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 ZNF543Q08ER8 600 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 MTF1Q14872 753 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 RAB42Q8N4Z0 105 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 APPL2Q8NEU8 664 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 SLC26A4O43511 780 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 CACNB2Q08289 660 aaPredicted RBP20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 MTMR2Q13614 643 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 TAGAPQ8N103 731 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 ARL8AQ96BM9 186 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 DCUN1D1Q96GG9 259 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 C7orf25Q9BPX7 421 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 PHF2O75151 1096 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 STOX1Q6ZVD7 989 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 PARP9Q8IXQ6 854 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 OTUB1Q96FW1 271 aaPredicted RBP20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 LRRC1Q9BTT6 524 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 KLHL11Q9NVR0 708 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 ARHGAP26Q9UNA1 814 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 AFF2P51816 1311 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 A0A1B0GTH6 734 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 RAD23BP54727 409 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 BYSLQ13895 437 aaKnown RBP20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 SPATA21Q7Z572 469 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 ADSSL1Q8N142 457 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 SLC35G2Q8TBE7 412 aa20.36■□□□□ 0.85
NECTIN1-201ENST00000264025 ARHGAP10A1A4S6 786 aa20.35■□□□□ 0.85
NECTIN1-201ENST00000264025 PRPF4O43172 522 aaKnown RBP eCLIP20.35■□□□□ 0.85
NECTIN1-201ENST00000264025 VCPP55072 806 aaKnown RBP20.35■□□□□ 0.85
NECTIN1-201ENST00000264025 SSU72P8A0A1W2PR75 194 aa20.35■□□□□ 0.85
NECTIN1-201ENST00000264025 SRGNP10124 158 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms