RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 CYP26A1O43174 497 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■□ 22.5
VPS26A-201ENST00000263559 RGS2P41220 211 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 PHKA2P46019 1235 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 IRX5P78411 483 aaPredicted RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 IRF5Q13568 498 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 MPZL3Q6UWV2 235 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 SEPT11Q9NVA2 429 aaKnown RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 PALMO75781 387 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 DHX38Q92620 1227 aaKnown RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 ACP6Q9NPH0 428 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 CTGFP29279 349 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 PIK3CAP42336 1068 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 GALCP54803 685 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 GCNT1Q02742 428 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 TLK2Q86UE8 772 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
VPS26A-201ENST00000263559 TAS2R14Q9NYV8 317 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 INTUQ9ULD6 942 aa17.04■□□□□ 0.32
VPS26A-201ENST00000263559 ATP8B3O60423 1300 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 ZNF185O15231 689 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 GRM1Q13255 1194 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 ZNF568Q3ZCX4 644 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 WDR44Q5JSH3 913 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 TEX35Q5T0J7 233 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 NOP9Q86U38 636 aaKnown RBP17.03■□□□□ 0.32
VPS26A-201ENST00000263559 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-201ENST00000263559 THNSL1Q8IYQ7 743 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 EPS8L1Q8TE68 723 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 C1orf112Q9NSG2 853 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 PCDHGC5Q9Y5F6 944 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 MGAMO43451 1857 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 FAM170AA1A519 330 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 NCK2O43639 380 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 TM4SF4P48230 202 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 SCARA3Q6AZY7 606 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 SPOPLQ6IQ16 392 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 RPUSD2Q8IZ73 545 aaKnown RBP17.03■□□□□ 0.32
VPS26A-201ENST00000263559 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 GOLGA1Q92805 767 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 FAM212AQ96EL1 285 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 CAPZA3Q96KX2 299 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 APBA2Q99767 749 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 EPC1Q9H2F5 836 aa17.03■□□□□ 0.32
VPS26A-201ENST00000263559 NOCTQ9UK39 431 aaKnown RBP17.03■□□□□ 0.32
VPS26A-201ENST00000263559 CHRNB2P17787 502 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 OSTNP61366 133 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 AMHR2Q16671 573 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 FAM187BQ17R55 369 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 KIAA0319LQ8IZA0 1049 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 CEP120Q8N960 986 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 KAT2BQ92831 832 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 ARID3AQ99856 593 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 TLR10Q9BXR5 811 aa17.02■□□□□ 0.32
VPS26A-201ENST00000263559 CTAGE15A4D2H0 777 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 GRID2IPA4D2P6 1211 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 IGHA2P01877 340 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 CTAGE8P0CG41 777 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 ANK1P16157 1881 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 NOP2P46087 812 aaKnown RBP17.02■□□□□ 0.31
VPS26A-201ENST00000263559 TAF3Q5VWG9 929 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 CTAGE6Q86UF2 777 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 WDR49Q8IV35 697 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 CTAGE4Q8IX94 777 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 CDT1Q9H211 546 aa17.02■□□□□ 0.31
VPS26A-201ENST00000263559 PRLRP16471 622 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 LMBR1Q8WVP7 490 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 MMS19Q96T76 1030 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 APOBEC3GQ9HC16 384 aaKnown RBP17.01■□□□□ 0.31
VPS26A-201ENST00000263559 GPR25O00155 361 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 PHACTR2O75167 634 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 FTCDO95954 541 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 F2P00734 622 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 CYP11B1P15538 503 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 ABCB4P21439 1286 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 FAM81BQ96LP2 452 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 OSBPL9Q96SU4 736 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 PCDHB18PQ96TA0 734 aa17.01■□□□□ 0.31
VPS26A-201ENST00000263559 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-201ENST00000263559 A0A0A6YYK5 440 aaPredicted RBP17■□□□□ 0.31
VPS26A-201ENST00000263559 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms