RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C6orf118Q5T5N4 469 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 EIF1ADQ8N9N8 165 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 C1orf131Q8NDD1 294 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 NCAPGQ9BPX3 1015 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CNOT10Q9H9A5 744 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 PASKQ96RG2 1323 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CETPP11597 493 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 PLS3P13797 630 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CTNNA2P26232 953 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CNGA1P29973 690 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 QARSP47897 775 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 MRPS9P82933 396 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 SLC15A2Q16348 729 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 BTNL9Q6UXG8 535 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 GSTA5Q7RTV2 222 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CCDC63Q8NA47 563 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 CHURC1Q8WUH1 139 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 N4BP2L2Q92802 583 aaPredicted RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 SGSM3Q96HU1 749 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 C11orf70Q9BRQ4 267 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 C10orf88Q9H8K7 445 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 AAASQ9NRG9 546 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.85
MSH4-201ENST00000263187 SEL1LQ9UBV2 794 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 MIF4GDA9UHW6 222 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 H0YIN7 160 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 P4HBP07237 508 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 NUDT17P0C025 328 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 ZSCAN5DPP0CG00 497 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 RALAP11233 206 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 KRT10P13645 584 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 SCP2P22307 547 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 ANXA13P27216 316 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 ACOT2P49753 483 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 SIX1Q15475 284 aaPredicted RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 CNGA2Q16280 664 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 TKFCQ3LXA3 575 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 MYCBPQ99417 103 aaPredicted RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 TAOK3Q9H2K8 898 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 PCDHA3Q9Y5H8 950 aa9.76□□□□□ -0.85
MSH4-201ENST00000263187 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.76□□□□□ -0.85
MSH4-201ENST00000263187 GOLGA8SH3BPF8 625 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 GOLGA8MH3BSY2 632 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 HNRNPDLO14979 420 aaKnown RBP9.75□□□□□ -0.85
MSH4-201ENST00000263187 ETS1P14921 441 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 MFAP3P55082 362 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 ELF3P78545 371 aaPredicted RBP9.75□□□□□ -0.85
MSH4-201ENST00000263187 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 SV2AQ7L0J3 742 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 TRPM8Q7Z2W7 1104 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 FAM71AQ8IYT1 594 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 SPOCK2Q92563 424 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 CXorf56Q9H5V9 222 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 ACTR5Q9H9F9 607 aaPredicted RBP9.75□□□□□ -0.85
MSH4-201ENST00000263187 ZNF277Q9NRM2 450 aaPredicted RBP9.75□□□□□ -0.85
MSH4-201ENST00000263187 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 C5orf60A6NFR6 353 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 PODXLO00592 558 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 DHX15O43143 795 aaKnown RBP9.75□□□□□ -0.85
MSH4-201ENST00000263187 BRAFP15056 766 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 TCF4P15884 667 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 NPTX2P47972 431 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 ADCY2Q08462 1091 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 DLGAP5Q15398 846 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 SYCP2LQ5T4T6 812 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 C11orf63Q6NUN7 778 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 ANKS1BQ7Z6G8 1248 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 ART4Q93070 314 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 STAMBPL1Q96FJ0 436 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 PGM2Q96G03 612 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 TMEM206Q9H813 350 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 KIF9Q9HAQ2 790 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 PCYOX1Q9UHG3 505 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 STK24Q9Y6E0 443 aa9.75□□□□□ -0.85
MSH4-201ENST00000263187 POC1B-GALNT4F8VUJ3 575 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 BANF1O75531 89 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 CCNE2O96020 404 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 PAEPP09466 180 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 RARGP13631 454 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 TNNI1P19237 187 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 WNT7BP56706 349 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 TMED2Q15363 201 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 GLIS1Q8NBF1 620 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 HELQQ8TDG4 1101 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 WNK4Q96J92 1243 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 NT5C1BQ96P26 610 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 WNT8AQ9H1J5 351 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 KMT5AQ9NQR1 393 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 RAB20Q9NX57 234 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 ZNF70Q9UC06 446 aaPredicted RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 ANAPC5Q9UJX4 755 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 DIS3Q9Y2L1 958 aaKnown RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 SCN9AQ15858 1988 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms