RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NDC80O14777 642 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 OCM2P0CE71 109 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 OCMP0CE72 109 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 ESRRAP11474 423 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 UBA7P41226 1012 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 IREB2P48200 963 aaKnown RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 GFPT1Q06210 699 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 CALCOCO2Q13137 446 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 NR5A1Q13285 461 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 CREG2Q8IUH2 290 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 EPSTI1Q96J88 318 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 MAML3Q96JK9 1138 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 PPP1R16BQ96T49 567 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 ZNF184Q99676 751 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 SLC39A3Q9BRY0 314 aa8.89□□□□□ -0.99
LDB3-201ENST00000263066 OXCT2Q9BYC2 517 aaPredicted RBP8.89□□□□□ -0.99
LDB3-201ENST00000263066 ZNF541Q9H0D2 1346 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 NFKBIEO00221 500 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 PALMO75781 387 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 LYNP07948 512 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 TPBGLP0DKB5 382 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 YBX3P16989 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
LDB3-201ENST00000263066 FGFR2P21802 821 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 KIF23Q02241 960 aaPredicted RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 B3GNT6Q6ZMB0 384 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 NOP9Q86U38 636 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 ZNF280CQ8ND82 737 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 TTC16Q8NEE8 873 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 PDZD8Q8NEN9 1154 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 NAT14Q8WUY8 206 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 OLFML3Q9NRN5 406 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ATAD3AQ9NVI7 634 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 CTNNAL1Q9UBT7 734 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SLC12A4Q9UP95 1085 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 HEY1Q9Y5J3 304 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 UTYO14607 1347 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 A0A0J9YVX5 310 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SMCO2A6NFE2 343 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SART1O43290 800 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 CYTH3O43739 400 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SNX3O60493 162 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ASLP04424 464 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 FLT3P36888 993 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 RGS2P41220 211 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 HERVK_113P62684 666 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 HPCAP84074 193 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 DSG1Q02413 1049 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ERMARDQ5T6L9 678 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 CROCCP2Q86T23 111 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 RUBCNQ92622 972 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 CCDC77Q9BR77 488 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 TRPC7Q9HCX4 862 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 AGPAT5Q9NUQ2 364 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 MRC1P22897 1456 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ZNF609O15014 1411 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 GPR75-ASB3A0A0A6YYF3 556 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 SRRM3A6NNA2 597 aaPredicted RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 F5H6K3 240 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 CCNT1O60563 726 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 SPAG7O75391 227 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 KRT36O76013 467 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 CBX6O95503 412 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ACSL3O95573 720 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 DDX5P17844 614 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 IL9RQ01113 521 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 KLRC3Q07444 240 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 RAPGEF1Q13905 1077 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 FAM47CQ5HY64 1035 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 PEX26Q7Z412 305 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 FOXP4Q8IVH2 680 aaPredicted RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 SH2D3AQ9BRG2 576 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 PAIP1Q9H074 479 aaKnown RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 HACD3Q9P035 362 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 RNF14Q9UBS8 474 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 ASB3Q9Y575 518 aa8.88□□□□□ -0.99
LDB3-201ENST00000263066 GPC6Q9Y625 555 aaPredicted RBP8.88□□□□□ -0.99
LDB3-201ENST00000263066 A0A0G2JND7 137 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L15C9J2P7 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L13C9JLJ4 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L11C9JVI0 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L18D6R9N7 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L22D6RA61 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L17D6RBQ6 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L19D6RCP7 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L20D6RJB6 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 CLPTM1O96005 669 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 EIF2AK2P19525 551 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 DNM2P50570 870 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 MAP3K7CLP57077 242 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L24Q0WX57 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 MAP3K21Q5TCX8 1036 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 C1orf146Q5VVC0 180 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 DAB2IPQ5VWQ8 1189 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms