RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TRIM49CP0CI26 452 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 MIB1Q86YT6 1006 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 SLC13A1Q9BZW2 595 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 MRPS31Q92665 395 aaKnown RBP16.75■□□□□ 0.27
SHANK3-201ENST00000262795 SLITRK1Q96PX8 696 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 TEX12Q9BXU0 123 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
SHANK3-201ENST00000262795 PCDHB9Q9Y5E1 797 aa16.75■□□□□ 0.27
SHANK3-201ENST00000262795 DARSP14868 501 aaKnown RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 CDH6P55285 790 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 COASYQ13057 564 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 PDAP1Q13442 181 aaKnown RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 GPR108Q9NPR9 543 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 SPATS2LQ9NUQ6 558 aaKnown RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 ASS1P00966 412 aaKnown RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 RAD54LQ92698 747 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 CYP4F11Q9HBI6 524 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 CHST12Q9NRB3 414 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 B3GAT3O94766 335 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 AMHP03971 560 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 AVPR1AP37288 418 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 IL9RQ01113 521 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 PRKCEQ02156 737 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 CCDC85BQ15834 202 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 A6NNZ2 444 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 NDUFV1P49821 464 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 TMPRSS15P98073 1019 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 TUBB8Q3ZCM7 444 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 ENAHQ8N8S7 591 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 PFASO15067 1338 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 GPR182O15218 404 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 HIST1H2AGP0C0S8 130 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 HIST1H2ADP20671 130 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 PIP4K2CQ8TBX8 421 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 GIPC2Q8TF65 315 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 SCG3Q8WXD2 468 aaKnown RBP16.74■□□□□ 0.27
SHANK3-201ENST00000262795 HIST1H2AHQ96KK5 128 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 CRAMP1Q96RY5 1269 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 HIST1H2AJQ99878 128 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 H2AFJQ9BTM1 129 aa16.74■□□□□ 0.27
SHANK3-201ENST00000262795 NCAM1P13591 858 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 POLE2P56282 527 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 RINLQ6ZS11 566 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 CCDC124Q96CT7 223 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 SERPING1P05155 500 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 CCHCR1Q8TD31 782 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DBR1Q9UK59 544 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 FGFR1P11362 822 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 CCL23P55773 120 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 SV2CQ496J9 727 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■□□□ 12.8
SHANK3-201ENST00000262795 PCDHGB4Q9UN71 923 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 ROR1Q01973 937 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DCAF6Q58WW2 860 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 ATF7IP2Q5U623 682 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 TSEN34Q9BSV6 310 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 CYP2C8P10632 490 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 FLT1P17948 1338 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 EPHB3P54753 998 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DHX9Q08211 1270 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 SPATA16Q9BXB7 569 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 PALMDQ9NP74 551 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 DDX5P17844 614 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 ANKS6Q68DC2 871 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 PGLYRP2Q96PD5 576 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■■■□ 24.7
SHANK3-201ENST00000262795 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
SHANK3-201ENST00000262795 SLC39A10Q9ULF5 831 aa16.73■□□□□ 0.27
SHANK3-201ENST00000262795 MEFVO15553 781 aaPredicted RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 NDUFB10O96000 172 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 HDLBPQ00341 1268 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 PTRHD1Q6GMV3 140 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CENPUQ71F23 418 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 ZFYVE1Q9HBF4 777 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CSDE1O75534 798 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 WBP4O75554 376 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CTXN3Q4LDR2 81 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 CEP19Q96LK0 163 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 SLC38A7Q9NVC3 462 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 LOC102724159A0A0B4J2E5 919 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 EMC2Q15006 297 aa16.72■□□□□ 0.27
SHANK3-201ENST00000262795 PWP2Q15269 919 aaKnown RBP16.72■□□□□ 0.27
SHANK3-201ENST00000262795 GOLGA7BQ2TAP0 167 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 791.5 ms